pCI: A parallel configuration interaction software package for high-precision atomic structure calculations

IF 3.4 2区 物理与天体物理 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer Physics Communications Pub Date : 2025-03-01 Epub Date: 2024-12-06 DOI:10.1016/j.cpc.2024.109463
Charles Cheung , Mikhail G. Kozlov , Sergey G. Porsev , Marianna S. Safronova , Ilya I. Tupitsyn , Andrey I. Bondarev
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引用次数: 0

Abstract

We introduce the pCI software package for high-precision atomic structure calculations. The standard method of calculation is based on the configuration interaction (CI) method to describe valence correlations, but can be extended to attain better accuracy by including core correlations via many-body perturbation theory (CI+MBPT) or the all-order (CI+all-order) method. The software package enables calculations of atomic properties, including energy levels, g-factors, hyperfine structure constants, multipole transition matrix elements, polarizabilities, and isotope shifts. It also features modern high-performance computing paradigms, including dynamic memory allocations and large-scale parallelization via the message-passing interface, to optimize and accelerate computations. To improve accuracy of the calculations, we include a supplementary program package to calculate QED corrections via a variant of QEDMOD, as well as a package to include core correlations.

Program summary

Program Title: pCI
CPC Library link to program files: https://doi.org/10.17632/2kn5npnxj7.1
Developer's repository link: https://github.com/ud-pci/pCI
Licensing provisions: GPLv3
Programming language: Fortran
Supplementary material: Documentation available at https://pci.readthedocs.io
Nature of problem: Calculation of atomic and ionic properties, including energy levels, hyperfine structure constants, multipole transition matrix elements, and polarizabilities.
Solution method: The software package calculates energies and associated wave functions for the desired atomic states using the configuration interaction method. Using calculated wave functions, different atomic properties can be obtained, including g-factors, hyperfine structure constants, multipole transition amplitudes, polarizabilities, and others.
Additional comments including restrictions and unusual features: All serial programs have been compiled and tested with the freely available Intel Fortran compilers “ifx” and “ifort”, and all parallel programs with the OpenMPI wrapper “mpifort” for Intel Fortran compilers.
One-electron orbitals outside the nucleus are defined on the radial grid points. Inside the nucleus, they are described in a Taylor expansion over r/R, where R is the nuclear radius.
This software package is not designed for calculations of high Rydberg states and continuous spectrum. The parallel programs are intended to be run on large computing clusters.

References

  • [1]
    M.G. Kozlov et al., Comput. Phys. Commun. 195 (2015) 199.
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用于高精度原子结构计算的并行配置交互软件包
介绍了用于高精度原子结构计算的pCI软件包。标准的计算方法是基于组态相互作用(CI)方法来描述价相关性,但可以通过多体摄动理论(CI+MBPT)或全阶(CI+全阶)方法来扩展包括核心相关性以获得更好的精度。该软件包能够计算原子性质,包括能级、g因子、超精细结构常数、多极跃迁矩阵元素、极化率和同位素位移。它还具有现代高性能计算范例,包括动态内存分配和通过消息传递接口进行大规模并行化,以优化和加速计算。为了提高计算的准确性,我们包括了一个补充程序包,通过QEDMOD的一个变体来计算QED更正,以及一个包含核心相关性的包。程序摘要程序标题:pCICPC库链接到程序文件:https://doi.org/10.17632/2kn5npnxj7.1Developer's存储库链接:https://github.com/ud-pci/pCILicensing规定:gplv3编程语言:fortran补充材料:问题的文档可在https://pci.readthedocs.ioNature:原子和离子性质的计算,包括能级,超精细结构常数,多极跃迁矩阵元素和极化率。解决方法:软件包使用组态相互作用法计算所需原子状态的能量和相关波函数。利用计算的波函数,可以得到不同的原子性质,包括g因子、超精细结构常数、多极跃迁幅度、极化率等。附加的注释包括限制和不寻常的特性:所有串行程序都是用免费的Intel Fortran编译器“ifx”和“ifort”编译和测试的,所有并行程序都是用Intel Fortran编译器的OpenMPI包装器“mpifort”编译的。原子核外的单电子轨道在径向网格点上被定义。在原子核内部,它们被描述为对r/ r的泰勒展开,其中r是原子核半径。该软件包不是为计算高里德伯态和连续谱而设计的。并行程序旨在在大型计算集群上运行科兹洛夫等人,计算机。理论物理。common . 195 (2015)
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Computer Physics Communications
Computer Physics Communications 物理-计算机:跨学科应用
CiteScore
12.10
自引率
3.20%
发文量
287
审稿时长
5.3 months
期刊介绍: The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper. Computer Programs in Physics (CPiP) These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged. Computational Physics Papers (CP) These are research papers in, but are not limited to, the following themes across computational physics and related disciplines. mathematical and numerical methods and algorithms; computational models including those associated with the design, control and analysis of experiments; and algebraic computation. Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.
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