Robustness and limitations of maximum entropy in plant community assembly

IF 7.3 2区 环境科学与生态学 Q1 ECOLOGY Ecological Informatics Pub Date : 2025-02-03 DOI:10.1016/j.ecoinf.2025.103031
Jelyn Gerkema , Daniel E. Bunker , Andrew M. Cunliffe , Erika Bazzato , Michela Marignani , Tommaso Sitzia , Isabelle Aubin , Stefano Chelli , Julieta A. Rosell , Peter Poschlod , Josep Penuelas , Arildo S. Dias , Christian Rossi , Tanvir A. Shovon , Juan A. Campos , Mark C. Vanderwel , Sharif A. Mukul , Bruno E.L. Cerabolini , Thomas Sibret , Bruno Hérault , Edwin T. Pos
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Abstract

An in-depth understanding of local plant community assembly is critical to direct conservation efforts to promising areas and increase the efficiency of management strategies. This, however, remains elusive due to the sheer complexity of ecological processes. The maximum entropy-based Community Assembly via Trait Selection (CATS) model was designed to quantify the relative contributions of trait-based filtering, dispersal mass effects, and stochastic processes on community assembly. As a maximum entropy model, it does so without introducing additional bias or assumptions. Despite its increasing use, questions regarding its robustness and potential limitations remain. Here, we compared model predictions using either local or database-derived trait values, across different levels of species richness and between different taxonomic levels. A total of 19 datasets and 790 plots were analysed, spanning multiple habitat types (n = 18) and biomes (n = 7). Results indicate trait value origin does indeed influence model outcomes, warranting caution in selecting the method for obtaining trait data. We hypothesise that, for example, intraspecific trait variation combined with trait-based filtering or stochastic processes causes local and database trait values to deviate, potentially even further exacerbated by imputing missing trait data. Furthermore, trait-related information obtained from the model decreased with increasing species richness. We further hypothesise this could signal that stochastic processes are more dominant within species-rich systems, for example, due to functional redundancy or the existence of multiple fitness strategies. This general pattern was conserved across biomes, although with varying strength, showing CATS’ robustness despite these challenges.
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植物群落装配中最大熵的鲁棒性和局限性
深入了解当地植物群落的组成对指导保护工作和提高管理策略的效率至关重要。然而,由于生态过程的复杂性,这仍然是难以捉摸的。设计了基于最大熵的基于性状选择的群落组装模型,以量化基于性状过滤、扩散质量效应和随机过程对群落组装的相对贡献。作为一个最大熵模型,它不会引入额外的偏差或假设。尽管它的使用越来越多,但关于其稳健性和潜在局限性的问题仍然存在。在这里,我们在不同物种丰富度水平和不同分类水平之间,比较了使用本地或数据库派生的性状值的模型预测。共分析了19个数据集和790个样地,涵盖多种生境类型(n = 18)和生物群系(n = 7)。结果表明性状值起源确实影响模型结果,因此在选择获得性状数据的方法时需要谨慎。我们假设,例如,种内性状变异与基于性状的过滤或随机过程相结合,导致局部和数据库性状值偏离,甚至可能因输入缺失的性状数据而进一步恶化。此外,模型获得的性状相关信息随着物种丰富度的增加而减少。我们进一步假设,这可能表明随机过程在物种丰富的系统中更占优势,例如,由于功能冗余或多种适应度策略的存在。尽管强度不同,但这种一般模式在整个生物群系中都是保守的,这表明尽管面临这些挑战,CATS仍然具有稳健性。
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来源期刊
Ecological Informatics
Ecological Informatics 环境科学-生态学
CiteScore
8.30
自引率
11.80%
发文量
346
审稿时长
46 days
期刊介绍: The journal Ecological Informatics is devoted to the publication of high quality, peer-reviewed articles on all aspects of computational ecology, data science and biogeography. The scope of the journal takes into account the data-intensive nature of ecology, the growing capacity of information technology to access, harness and leverage complex data as well as the critical need for informing sustainable management in view of global environmental and climate change. The nature of the journal is interdisciplinary at the crossover between ecology and informatics. It focuses on novel concepts and techniques for image- and genome-based monitoring and interpretation, sensor- and multimedia-based data acquisition, internet-based data archiving and sharing, data assimilation, modelling and prediction of ecological data.
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