{"title":"The catalytic action of enzymes exposed to charged substrates outperforms the activity exerted on their neutral counterparts","authors":"Alessandra Stefan , Alejandro Hochkoeppler","doi":"10.1016/j.bbrc.2025.151436","DOIUrl":null,"url":null,"abstract":"<div><div>Enzymes perform their catalytic action according to mechanisms featuring exquisite specificity, up to the selection of substrate conformers. However, regardless of this high specificity enzymes are able to deal with a repertoire of substrates, whose conversion into reaction products can occur with markedly different rates. Among the factors affecting the velocity of enzyme-catalyzed reactions, the presence in the substrate of an electrostatic charge could be of importance. Here we report on the kinetic parameters of four enzymes (bovine carbonic anhydrase and α-chymotrypsin, <em>Escherichia coli</em> β-galactosidase, and sweet almond β-glucosidase) determined using a NO<sub>2</sub>-containing charged substrate or its neutral counterpart. Remarkably, all the considered enzymes were found more effective when exposed to the charged substrates, featuring <em>K</em><sub>m</sub> and <em>k</em><sub>cat</sub> values respectively lower and higher than those determined using the neutral substrates. Furthermore, by means of ultrafiltration experiments we detected the binding of <em>o</em>-nitrophenyl-β-<span>d</span>-galactopyranoside to a multiplicity of sites in <em>E. coli</em> β-galactosidase. Overall, our observations suggest that the unspecific binding of substrate to enzyme surface aids the cycling of subsequent catalytic turnovers.</div></div>","PeriodicalId":8779,"journal":{"name":"Biochemical and biophysical research communications","volume":"751 ","pages":"Article 151436"},"PeriodicalIF":2.5000,"publicationDate":"2025-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemical and biophysical research communications","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0006291X25001500","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Enzymes perform their catalytic action according to mechanisms featuring exquisite specificity, up to the selection of substrate conformers. However, regardless of this high specificity enzymes are able to deal with a repertoire of substrates, whose conversion into reaction products can occur with markedly different rates. Among the factors affecting the velocity of enzyme-catalyzed reactions, the presence in the substrate of an electrostatic charge could be of importance. Here we report on the kinetic parameters of four enzymes (bovine carbonic anhydrase and α-chymotrypsin, Escherichia coli β-galactosidase, and sweet almond β-glucosidase) determined using a NO2-containing charged substrate or its neutral counterpart. Remarkably, all the considered enzymes were found more effective when exposed to the charged substrates, featuring Km and kcat values respectively lower and higher than those determined using the neutral substrates. Furthermore, by means of ultrafiltration experiments we detected the binding of o-nitrophenyl-β-d-galactopyranoside to a multiplicity of sites in E. coli β-galactosidase. Overall, our observations suggest that the unspecific binding of substrate to enzyme surface aids the cycling of subsequent catalytic turnovers.
期刊介绍:
Biochemical and Biophysical Research Communications is the premier international journal devoted to the very rapid dissemination of timely and significant experimental results in diverse fields of biological research. The development of the "Breakthroughs and Views" section brings the minireview format to the journal, and issues often contain collections of special interest manuscripts. BBRC is published weekly (52 issues/year).Research Areas now include: Biochemistry; biophysics; cell biology; developmental biology; immunology
; molecular biology; neurobiology; plant biology and proteomics