Highly efficient path-integral molecular dynamics simulations with GPUMD using neuroevolution potentials: Case studies on thermal properties of materials.

IF 3.1 2区 化学 Q3 CHEMISTRY, PHYSICAL Journal of Chemical Physics Pub Date : 2025-02-14 DOI:10.1063/5.0241006
Penghua Ying, Wenjiang Zhou, Lucas Svensson, Esmée Berger, Erik Fransson, Fredrik Eriksson, Ke Xu, Ting Liang, Jianbin Xu, Bai Song, Shunda Chen, Paul Erhart, Zheyong Fan
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Abstract

Path-integral molecular dynamics (PIMD) simulations are crucial for accurately capturing nuclear quantum effects in materials. However, their computational intensity often makes it challenging to address potential finite-size effects. Here, we present a specialized graphics processing units (GPUs) implementation of PIMD methods, including ring-polymer molecular dynamics (RPMD) and thermostatted ring-polymer molecular dynamics (TRPMD), into the open-source Graphics Processing Units Molecular Dynamics (GPUMD) package, combined with highly accurate and efficient machine-learned neuroevolution potential (NEP) models. This approach achieves almost the accuracy of first-principles calculations with the computational efficiency of empirical potentials, enabling large-scale atomistic simulations that incorporate nuclear quantum effects, effectively overcoming finite-size limitations at a relatively affordable computational cost. We validate and demonstrate the efficacy of the combined NEP-PIMD approach by examining various thermal properties of diverse materials, including lithium hydride (LiH), three porous metal-organic frameworks (MOFs), liquid water, and elemental aluminum. For LiH, our NEP-PIMD simulations successfully capture the isotope effect, reproducing the experimentally observed dependence of the lattice parameter on the reduced mass. For MOFs, our results reveal that achieving good agreement with experimental data requires consideration of both nuclear quantum effects and dispersive interactions. For water, our PIMD simulations capture the significant impact of nuclear quantum effects on its microscopic structure. For aluminum, the TRPMD method effectively captures thermal expansion and phonon properties, aligning well with quantum mechanical predictions. This efficient GPU-accelerated NEP-PIMD implementation in the GPUMD package provides an alternative, accessible, accurate, and scalable tool for exploring complex material properties influenced by nuclear quantum effects, with potential applications across a broad range of materials.

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利用神经进化电位的GPUMD高效路径积分分子动力学模拟:材料热特性的案例研究。
路径积分分子动力学(PIMD)模拟对于准确捕获材料中的核量子效应至关重要。然而,它们的计算强度通常使得解决潜在的有限尺寸效应具有挑战性。在这里,我们提出了一个专门的图形处理单元(gpu)实现PIMD方法,包括环聚合物分子动力学(RPMD)和温控环聚合物分子动力学(TRPMD),到开源图形处理单元分子动力学(GPUMD)包中,结合高精度和高效的机器学习神经进化潜力(NEP)模型。这种方法几乎达到了第一性原理计算的精度和经验势的计算效率,实现了包含核量子效应的大规模原子模拟,以相对负担得起的计算成本有效地克服了有限尺寸的限制。我们通过检测不同材料(包括氢化锂(LiH)、三孔金属有机框架(mof)、液态水和单质铝)的各种热性能,验证并证明了NEP-PIMD方法的有效性。对于LiH,我们的NEP-PIMD模拟成功地捕获了同位素效应,再现了实验观察到的晶格参数对减少质量的依赖。对于mof,我们的研究结果表明,要与实验数据保持良好的一致性,需要同时考虑核量子效应和色散相互作用。对于水,我们的PIMD模拟捕获了核量子效应对其微观结构的重大影响。对于铝,TRPMD方法有效地捕获了热膨胀和声子特性,与量子力学预测很好地吻合。GPUMD包中的这种高效gpu加速NEP-PIMD实现为探索受核量子效应影响的复杂材料特性提供了一种替代的、可访问的、准确的和可扩展的工具,具有广泛的材料应用潜力。
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来源期刊
Journal of Chemical Physics
Journal of Chemical Physics 物理-物理:原子、分子和化学物理
CiteScore
7.40
自引率
15.90%
发文量
1615
审稿时长
2 months
期刊介绍: The Journal of Chemical Physics publishes quantitative and rigorous science of long-lasting value in methods and applications of chemical physics. The Journal also publishes brief Communications of significant new findings, Perspectives on the latest advances in the field, and Special Topic issues. The Journal focuses on innovative research in experimental and theoretical areas of chemical physics, including spectroscopy, dynamics, kinetics, statistical mechanics, and quantum mechanics. In addition, topical areas such as polymers, soft matter, materials, surfaces/interfaces, and systems of biological relevance are of increasing importance. Topical coverage includes: Theoretical Methods and Algorithms Advanced Experimental Techniques Atoms, Molecules, and Clusters Liquids, Glasses, and Crystals Surfaces, Interfaces, and Materials Polymers and Soft Matter Biological Molecules and Networks.
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