Numerical methods for unraveling inter-particle potentials in colloidal suspensions: A comparative study for two-dimensional suspensions.

IF 3.1 2区 化学 Q3 CHEMISTRY, PHYSICAL Journal of Chemical Physics Pub Date : 2025-02-21 DOI:10.1063/5.0246890
Clare R Rees-Zimmerman, José Martín-Roca, David Evans, Mark A Miller, Dirk G A L Aarts, Chantal Valeriani
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Abstract

We compare three model-free numerical methods for inverting structural data to obtain interaction potentials, namely, iterative Boltzmann inversion (IBI), test-particle insertion (TPI), and a machine-learning (ML) approach called ActiveNet. Three archetypal models of two-dimensional colloidal systems are used as test cases: Weeks-Chandler-Anderson short-ranged repulsion, the Lennard-Jones potential, and a repulsive shoulder interaction with two length scales. Additionally, data on an experimental suspension of colloidal spheres are acquired by optical microscopy and used to test the inversion methods. The methods have different merits. IBI is the only choice when the radial distribution function is known but particle coordinates are unavailable. TPI requires snapshots with particle positions and can extract both pair- and higher-body potentials without the need for simulation. The ML approach can only be used when particles can be tracked in time and it returns the force rather than the potential. However, it can unravel pair interactions from any one-body forces (such as drag or propulsion) and does not rely on equilibrium distributions for its derivation. Our results may serve as a guide when a numerical method is needed for application to experimental data and as a reference for further development of the methodology itself.

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揭示胶体悬浮液中粒子间电位的数值方法:二维悬浮液的比较研究。
我们比较了三种用于反演结构数据以获得相互作用势的无模型数值方法,即迭代玻尔兹曼反演(IBI)、测试粒子插入(TPI)和机器学习(ML)方法ActiveNet。二维胶体系统的三个原型模型被用作测试用例:Weeks-Chandler-Anderson短程排斥,Lennard-Jones势和两个长度尺度的排斥肩相互作用。此外,通过光学显微镜获得了胶体球实验悬浮液的数据,并用于测试反演方法。这些方法各有优点。当径向分布函数已知而粒子坐标未知时,IBI是唯一的选择。TPI需要具有粒子位置的快照,并且可以在不需要模拟的情况下提取对和高体势。机器学习方法只能在粒子可以被及时跟踪的情况下使用,并且它返回的是力而不是势。然而,它可以从任何单一的力(如阻力或推进力)中揭示对相互作用,并且不依赖于其推导的平衡分布。当需要数值方法应用于实验数据时,我们的结果可以作为指南,并作为方法本身进一步发展的参考。
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来源期刊
Journal of Chemical Physics
Journal of Chemical Physics 物理-物理:原子、分子和化学物理
CiteScore
7.40
自引率
15.90%
发文量
1615
审稿时长
2 months
期刊介绍: The Journal of Chemical Physics publishes quantitative and rigorous science of long-lasting value in methods and applications of chemical physics. The Journal also publishes brief Communications of significant new findings, Perspectives on the latest advances in the field, and Special Topic issues. The Journal focuses on innovative research in experimental and theoretical areas of chemical physics, including spectroscopy, dynamics, kinetics, statistical mechanics, and quantum mechanics. In addition, topical areas such as polymers, soft matter, materials, surfaces/interfaces, and systems of biological relevance are of increasing importance. Topical coverage includes: Theoretical Methods and Algorithms Advanced Experimental Techniques Atoms, Molecules, and Clusters Liquids, Glasses, and Crystals Surfaces, Interfaces, and Materials Polymers and Soft Matter Biological Molecules and Networks.
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