pFedBCC: Personalizing Federated multi-target domain adaptive segmentation via Bi-pole Collaborative Calibration

IF 4.8 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer methods and programs in biomedicine Pub Date : 2025-05-01 Epub Date: 2025-02-12 DOI:10.1016/j.cmpb.2025.108635
Huaqi Zhang , Pengyu Wang , Jie Liu , Jing Qin
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Abstract

Background and Objective:

Multi-target domain adaptation (MTDA) is a well-established technology for unsupervised segmentation. It can significantly reduce the workload of large-scale data annotations, but assumes that each domain data can be freely accessed. However, data privacy limit its deployment in real-world medical scenes. Aiming at this problem, federated learning (FL) commits a paradigm to handle private cross-institution data.

Methods:

This paper makes the first attempt to apply FedMTDA to medical image segmentation by proposing a personalized Federated Bi-pole Collaborative Calibration (pFedBCC) framework, which leverages unannotated private client data and a public source-domain model to learn a global model at the central server for unsupervised multi-type immunohistochemically (IHC) image segmentation. Concretely, pFedBCC tackles two significant challenges in FedMTDA including client-side prediction drift and server-side aggregation drift via Semantic-affinity-driven Personalized Label Calibration (SPLC) and Source-knowledge-oriented Consistent Gradient Calibration (SCGC). To alleviate local prediction drift, SPLC personalizes a cross-domain graph reasoning module for each client, which achieves semantic-affinity alignment between high-level source- and target-domain features to produce pseudo labels that are semantically consistent with source-domain labels to guide client training. To further alleviate global aggregation drift, SCGC develops a new conflict-gradient clipping scheme, which takes the source-domain gradient as a guidance to ensure that all clients update with similar gradient directions and magnitudes, thereby improving the generalization of the global model.

Results:

pFedBCC is evaluated on private and public IHC benchmarks, including the proposed MT-IHC dataset, and the panCK, BCData, DLBC-Morph and LYON19 datasets. Overall, pFedBCC achieves the best performance of 88.8% PA on MT-IHC, as well as 88.4% PA on the LYON19 dataset, respectively.

Conclusions:

The proposed pFedBCC performs better than all comparison methods. The ablation study also confirms the contribution of SPLC and SCGC for unsupervised multi-type IHC image segmentation. This paper constructs a MT-IHC dataset containing more than 19,000 IHC images of 10 types (CgA, CK, Syn, CD, Ki67, P40, P53, EMA, TdT and BCL). Extensive experiments on the MT-IHC and public IHC datasets confirm that pFedBCC outperforms existing FL and DA methods.
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pFedBCC:基于双极协同校准的个性化联邦多目标域自适应分割
背景与目的:多目标域自适应(MTDA)是一种成熟的无监督分割技术。它可以显著减少大规模数据注释的工作量,但假设每个域数据都可以自由访问。然而,数据隐私限制了其在现实医疗场景中的部署。针对这一问题,联邦学习(FL)提出了一种处理私有跨机构数据的范例。方法:本文首次尝试将FedMTDA应用于医学图像分割,提出了一种个性化的联邦双极协同校准(pFedBCC)框架,该框架利用无注释的私人客户端数据和公共源域模型在中央服务器上学习全局模型,用于无监督的多类型免疫组织化学(IHC)图像分割。具体而言,pFedBCC通过语义亲和驱动的个性化标签校准(SPLC)和面向源知识的一致梯度校准(SCGC)解决了FedMTDA中的两个重大挑战,包括客户端预测漂移和服务器端聚合漂移。为了减轻局部预测漂移,SPLC为每个客户端个性化了一个跨域图推理模块,该模块实现了高级源域和目标域特征之间的语义亲和对齐,从而产生与源域标签在语义上一致的伪标签,以指导客户端训练。为了进一步缓解全局聚集漂移,SCGC开发了一种新的冲突梯度裁剪方案,该方案以源域梯度为导向,确保所有客户端以相似的梯度方向和大小更新,从而提高了全局模型的泛化能力。结果:pFedBCC在私人和公共IHC基准上进行了评估,包括拟议的MT-IHC数据集,以及panCK, BCData, DLBC-Morph和LYON19数据集。总体而言,pFedBCC在MT-IHC和LYON19数据集上分别达到了88.8%和88.4%的最佳性能。结论:pFedBCC优于所有的比较方法。消融研究也证实了SPLC和SCGC对无监督多类型IHC图像分割的贡献。本文构建了包含10种类型(CgA、CK、Syn、CD、Ki67、P40、P53、EMA、TdT和BCL)的19000多张免疫组化图像的MT-IHC数据集。在MT-IHC和公共IHC数据集上的大量实验证实,pFedBCC优于现有的FL和DA方法。
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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