[Development of a pre-processing workflow for real world data derived from multicenter clinical laboratories].

C Liu, X X Peng, S Y Cai, Y L Liu, C Zhang, F Hu
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Abstract

Objective: To develop a pre-processing workflow of real world data (RWD) derived from multicenter clinical laboratories so that the level of data standardization can be improved, and subsequently to produce more robust real world evidence (RWE). Methods: Purpose sampling was used to invite senior experts with experience in clinical research utilizing RWD, covering the fields of clinical laboratory, epidemiology, biostatistics, and clinical medicine. In-depth, semi-structured individual interviews were conducted and thematic analysis was used to analyze the collected data. Results: The in-depth interviews were completed in 16 experts. The experts unanimously agreed that pre-processing RWD derived from multicenter clinical laboratories is necessary prior to its application in research. Based on experts' insights, a comprehensive pre-processing workflow for RWD was constructed, comprising six key steps: ①developing a variable list based on research questions and distributing it to each clinical laboratory; ②conducting an initial quality assessment of RWD based on existing quality control results in clinical laboratories; ③cleaning the data; ④determining whether RWD (including categorical and continuous variables) is heterogeneity among different clinical laboratories; ⑤exploring potential sources of heterogeneity;⑥pre-processing RWD based on identified causes contributing to heterogeneity. Conclusion: The pre-processing workflow of RWD was established, to provide a methodological reference for controlling systematic errors in RWD derived from multicenter clinical laboratories, thereby enhancing the validity of RWE.

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[为多中心临床实验室的真实世界数据开发预处理工作流程]。
目的:建立多中心临床实验室真实世界数据(RWD)的预处理工作流程,以提高数据标准化水平,从而产生更可靠的真实世界证据(RWE)。方法:采用目的抽样的方法,邀请具有RWD临床研究经验的资深专家,涵盖临床检验、流行病学、生物统计学、临床医学等领域。进行了深入的、半结构化的个人访谈,并使用主题分析来分析收集到的数据。结果:完成了16位专家的深度访谈。专家们一致认为,来自多中心临床实验室的RWD在应用于研究之前有必要进行预处理。在专家意见的基础上,构建了完整的RWD预处理流程,包括六个关键步骤:①根据研究问题编制变量表并分发到各临床实验室;②根据临床实验室现有的质量控制结果,对RWD进行初步质量评价;③清理数据;④确定RWD(包括分类变量和连续变量)在不同临床实验室之间是否存在异质性;⑤探索潜在的异质性来源;⑥根据确定的导致异质性的原因对RWD进行预处理。结论:建立了RWD的预处理工作流程,为控制多中心临床实验室RWD的系统误差提供方法学参考,从而提高RWE的有效性。
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来源期刊
中华流行病学杂志
中华流行病学杂志 Medicine-Medicine (all)
CiteScore
5.60
自引率
0.00%
发文量
8981
期刊介绍: Chinese Journal of Epidemiology, established in 1981, is an advanced academic periodical in epidemiology and related disciplines in China, which, according to the principle of integrating theory with practice, mainly reports the major progress in epidemiological research. The columns of the journal include commentary, expert forum, original article, field investigation, disease surveillance, laboratory research, clinical epidemiology, basic theory or method and review, etc.  The journal is included by more than ten major biomedical databases and index systems worldwide, such as been indexed in Scopus, PubMed/MEDLINE, PubMed Central (PMC), Europe PubMed Central, Embase, Chemical Abstract, Chinese Science and Technology Paper and Citation Database (CSTPCD), Chinese core journal essentials overview, Chinese Science Citation Database (CSCD) core database, Chinese Biological Medical Disc (CBMdisc), and Chinese Medical Citation Index (CMCI), etc. It is one of the core academic journals and carefully selected core journals in preventive and basic medicine in China.
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