Identification of FZD7 as a potential ferroptosis-related diagnostic gene in endometriosis by bioinformatics analysis.

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Scientific Reports Pub Date : 2025-02-28 DOI:10.1038/s41598-025-90803-9
Jianyun Huang, Jinbo Li, Xiao Li, Hongling Guo, Shuqin Chen
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Abstract

An increasing number of research have suggested that ferroptosis plays an important role in endometriosis (EMS). This study was to identify a ferroptosis-related diagnosis gene in EMS by using bioinformatics. R Bioconductor package limma was used to analyzed the differentially expressed genes (DEGs) between the EMS groups and control groups. CIBERSORT was used to analyze the differences between the EMS group and control group of 22 immune cells. Quantitative real-time PCR (RT-qPCR) and Western blot (WB) were used to validate the expression level of FZD7 in tissue samples. The study found that FZD7 was upregulated and showed good diagnostic value in five EMS transcriptome databases. RT-qPCR and WB experiments also verified that FZD7 was upregulated in EMS. Moreover, we found that macrophages, especially M2 macrophages, were significantly infiltrated in EMS. FZD7 was positively correlated with M2 macrophage infiltration, and was up-regulated in the endometrial stromal cells co-cultured with macrophages. The study identified an ferroptosis repressor gene, FZD7, validated in five EMS transcriptome datasets, which is significantly up-regulated in ectopic lesions of EMS and is a potential target for the treatment of EMS.

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生物信息学分析鉴定FZD7作为子宫内膜异位症中铁中毒相关的潜在诊断基因。
越来越多的研究表明,铁下垂在子宫内膜异位症(EMS)中起重要作用。本研究旨在利用生物信息学方法鉴定EMS中一个与嗜铁相关的诊断基因。采用R Bioconductor包装limma分析EMS组与对照组之间的差异表达基因(DEGs)。采用CIBERSORT分析EMS组与对照组22个免疫细胞的差异。采用实时荧光定量PCR (RT-qPCR)和Western blot (WB)方法验证FZD7在组织样品中的表达水平。研究发现FZD7在5个EMS转录组数据库中表达上调,具有良好的诊断价值。RT-qPCR和WB实验也证实了FZD7在EMS中表达上调。此外,我们发现巨噬细胞,特别是M2巨噬细胞在EMS中明显浸润。FZD7与M2巨噬细胞浸润呈正相关,在与巨噬细胞共培养的子宫内膜基质细胞中表达上调。该研究发现了一个铁下垂抑制基因FZD7,在5个EMS转录组数据集中得到验证,该基因在EMS异位病变中显著上调,是EMS治疗的潜在靶点。
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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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