Neural Network with Attention Mechanism for Abnormality Detection and Localization in Diffusive Molecular Communication.

IF 3.7 4区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS IEEE Transactions on NanoBioscience Pub Date : 2025-01-09 DOI:10.1109/TNB.2025.3527520
Zhen Cheng, Zhichao Zhang, Heng Liu, Dongliang Jing, Weihua Gong, Kaikai Chi
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Abstract

Diffusive molecular communication (DMC) is an emerging paradigm in nanotechnology, which provides biocompatibility and nanoscale communication for many promising applications, such as targeted drug delivery, environmental monitoring, etc. However, detecting and localizing abnormalities in most of these applications is challenging, such as identifying tumor cells within the body or detecting pollution in air or water. In this paper, we introduce a method for detecting and localizing abnormalities in three dimensional DMC system with multiple sensors, receivers and one fusion center by adopting Transformer-based model with attention mechanism. We make full use of the attention mechanism to capture the inter-symbol interference (ISI) to improve the accuracy of detection and localization. In addition, we simplify the model structure to significantly reduce the complexity of this model. Furthermore, two strategies that different types of molecules (DMT) and same type of molecules (SMT) are released by sensors are considered. The training dataset and testing dataset are generated under these two strategies. Simulation results show that the information about the abnormality detection and localization can be obtained at the same time based on the Transformer-based model under DMT and SMT. Especially, our model outperforms the Informer-based model, deep neural networks (DNN)-based model and log-likelihood ratio (LLR) method.

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用于扩散式分子通讯中异常检测和定位的具有注意力机制的神经网络
扩散分子通信(DMC)是纳米技术中的一种新兴模式,它具有生物兼容性和纳米级通信功能,可用于靶向药物输送、环境监测等许多前景广阔的应用领域。然而,在大多数这些应用中,检测和定位异常是一项挑战,例如识别体内的肿瘤细胞或检测空气或水中的污染。在本文中,我们介绍了一种在具有多个传感器、接收器和一个融合中心的三维 DMC 系统中检测和定位异常的方法,该方法采用了基于变压器的模型和注意力机制。我们充分利用注意力机制来捕捉符号间干扰(ISI),以提高检测和定位的准确性。此外,我们还简化了模型结构,大大降低了模型的复杂度。此外,我们还考虑了传感器释放不同类型分子(DMT)和相同类型分子(SMT)的两种策略。在这两种策略下生成训练数据集和测试数据集。仿真结果表明,在 DMT 和 SMT 条件下,基于 Transformer 的模型可以同时获取异常检测和定位信息。特别是,我们的模型优于基于 Informer 的模型、基于深度神经网络(DNN)的模型和对数似然比(LLR)方法。
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来源期刊
IEEE Transactions on NanoBioscience
IEEE Transactions on NanoBioscience 工程技术-纳米科技
CiteScore
7.00
自引率
5.10%
发文量
197
审稿时长
>12 weeks
期刊介绍: The IEEE Transactions on NanoBioscience reports on original, innovative and interdisciplinary work on all aspects of molecular systems, cellular systems, and tissues (including molecular electronics). Topics covered in the journal focus on a broad spectrum of aspects, both on foundations and on applications. Specifically, methods and techniques, experimental aspects, design and implementation, instrumentation and laboratory equipment, clinical aspects, hardware and software data acquisition and analysis and computer based modelling are covered (based on traditional or high performance computing - parallel computers or computer networks).
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