{"title":"Aptamer-Based Diagnosis for <i><i>Plasmodium vivax</i></i> Specific Malaria.","authors":"Mohd Shoeb Alam, Abhijeet Dhiman, Tanu Bhardwaj, Sudarshana Chatterjee, Vaishali Lakra, Manish Tripathi, Khusboo Lohani, Yagya Dutt Sharma, Bijay Ranjan Mirdha, Amit Kumar, Tarun Kumar Sharma, Sumit Rathore","doi":"10.1021/acsinfecdis.4c01047","DOIUrl":null,"url":null,"abstract":"<p><p>Malaria, caused by a protozoan parasite of the genus <i>Plasmodium,</i> is a severe infectious disease with life-threatening consequences that has burdened mankind for centuries. Although <i><i>Plasmodium falciparum</i></i> (<i>P. falciparum</i>) malaria is more prevalent globally than <i><i>Plasmodium vivax</i></i> (<i>P. vivax</i>) malaria, India bears the largest burden of <i><i>P. vivax</i></i> malaria, with over 3.6 million cases accounting for ∼48% of global <i><i>P. vivax</i></i> malaria cases. Existing detection methods for <i><i>P. vivax</i></i> malaria are costly or tedious or have low accuracy. To address the need for a specific diagnostic assay for <i><i>P. vivax</i></i>, we generated aptamers specific to <i><i>Plasmodium vivax</i></i> tryptophan-rich antigen (PvTRAg). We employed them in an aptamer-linked immobilized sorbent assay (ALISA) to detect <i><i>P. vivax</i></i> malaria infections. The two most specific aptamers for PvTRAg, identified as Apt_14 and Apt_16, were obtained using the Systematic Evolution of Ligands by Exponential Enrichment. The dissociation constant (<i>K</i><sub>D</sub>) values of Apt_14 and Apt_16 were 1.9 and 1.2 nM, respectively, indicating high affinity to PvTRAg. The limit of detection for both aptamers was found to be 2.5 nM. During clinical validation, the sensitivity of 96% and 84% was obtained with Apt_14- and Apt_16-based ALISA with 100% specificity. The aptamers demonstrated nonsignificant cross-reactivity with other nonmalarial antigens and PvTRAg homologues along with a high level of selectivity for PvTRAg over <i><i>P. falciparum</i></i> antigens and various other antigens. Altogether, our findings confirm the effectiveness of DNA aptamers for the accurate diagnosis of <i><i>P. vivax</i></i> malaria and lay the groundwork for developing an aptamer-based diagnostic assay for malaria.</p>","PeriodicalId":17,"journal":{"name":"ACS Infectious Diseases","volume":" ","pages":""},"PeriodicalIF":4.0000,"publicationDate":"2025-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Infectious Diseases","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1021/acsinfecdis.4c01047","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
引用次数: 0
Abstract
Malaria, caused by a protozoan parasite of the genus Plasmodium, is a severe infectious disease with life-threatening consequences that has burdened mankind for centuries. Although Plasmodium falciparum (P. falciparum) malaria is more prevalent globally than Plasmodium vivax (P. vivax) malaria, India bears the largest burden of P. vivax malaria, with over 3.6 million cases accounting for ∼48% of global P. vivax malaria cases. Existing detection methods for P. vivax malaria are costly or tedious or have low accuracy. To address the need for a specific diagnostic assay for P. vivax, we generated aptamers specific to Plasmodium vivax tryptophan-rich antigen (PvTRAg). We employed them in an aptamer-linked immobilized sorbent assay (ALISA) to detect P. vivax malaria infections. The two most specific aptamers for PvTRAg, identified as Apt_14 and Apt_16, were obtained using the Systematic Evolution of Ligands by Exponential Enrichment. The dissociation constant (KD) values of Apt_14 and Apt_16 were 1.9 and 1.2 nM, respectively, indicating high affinity to PvTRAg. The limit of detection for both aptamers was found to be 2.5 nM. During clinical validation, the sensitivity of 96% and 84% was obtained with Apt_14- and Apt_16-based ALISA with 100% specificity. The aptamers demonstrated nonsignificant cross-reactivity with other nonmalarial antigens and PvTRAg homologues along with a high level of selectivity for PvTRAg over P. falciparum antigens and various other antigens. Altogether, our findings confirm the effectiveness of DNA aptamers for the accurate diagnosis of P. vivax malaria and lay the groundwork for developing an aptamer-based diagnostic assay for malaria.
期刊介绍:
ACS Infectious Diseases will be the first journal to highlight chemistry and its role in this multidisciplinary and collaborative research area. The journal will cover a diverse array of topics including, but not limited to:
* Discovery and development of new antimicrobial agents — identified through target- or phenotypic-based approaches as well as compounds that induce synergy with antimicrobials.
* Characterization and validation of drug target or pathways — use of single target and genome-wide knockdown and knockouts, biochemical studies, structural biology, new technologies to facilitate characterization and prioritization of potential drug targets.
* Mechanism of drug resistance — fundamental research that advances our understanding of resistance; strategies to prevent resistance.
* Mechanisms of action — use of genetic, metabolomic, and activity- and affinity-based protein profiling to elucidate the mechanism of action of clinical and experimental antimicrobial agents.
* Host-pathogen interactions — tools for studying host-pathogen interactions, cellular biochemistry of hosts and pathogens, and molecular interactions of pathogens with host microbiota.
* Small molecule vaccine adjuvants for infectious disease.
* Viral and bacterial biochemistry and molecular biology.