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Polyamine-Enriched Exosomes from Leishmania donovani Drive Host Macrophage Polarization via Immunometabolism Reprogramming. 来自唐诺瓦利什曼原虫的富含多胺的外泌体通过免疫代谢重编程驱动宿主巨噬细胞极化
IF 4 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-19 DOI: 10.1021/acsinfecdis.4c00738
Prince Sebastian, Madhulika Namdeo, Moodu Devender, Anjali Anand, Krishan Kumar, Jalaja Veronica, Radheshyam Maurya

Leishmania donovani (Ld) promastigotes secrete exosomes that are crucial in host-pathogen interactions and intercellular communication by carrying parasite-specific molecules. Although the composition of cargos in Leishmania exosomes is known, the effects of the unique metabolic repertoire on immunometabolism rewiring of macrophage polarization are poorly understood. Interestingly, we found the enrichment of polyamines (PAs) such as spermidine and putrescine in the Ld-exosomes. Herein, we investigate the critical polycationic molecules and their crucial role in parasite survival. Our study shows that PA inhibition or depletion significantly impairs parasite growth and fitness, particularly in drug-resistant strains. Furthermore, we aimed to elucidate the impact of PAs-enriched Ld-exosomes on host macrophages. The data demonstrated that macrophages efficiently internalized these exosomes, leading to heightened phagocytic activity and infectivity. In addition, internalized Ld-exosomes induced M2 macrophage polarization characterized by elevated Arginase-1 expression and activity. The increased expression of the solute carrier gene (SLC3A2) and elevated intracellular spermidine levels suggest that Ld-exosomes contribute to the host PAs pool and create an anti-inflammatory milieu. These findings highlight the essential role of PAs-enriched Ld-exosomes in parasite survival and establishing a pro-parasitic environment in the host macrophage.

唐诺瓦利什曼原虫(Ld)会分泌外泌体,这些外泌体携带寄生虫特异性分子,在宿主与病原体的相互作用和细胞间通信中起着至关重要的作用。虽然利什曼原虫外泌体中的载体成分已为人所知,但这种独特的新陈代谢复合物对免疫代谢重构巨噬细胞极化的影响却知之甚少。有趣的是,我们发现利什曼病外泌体中富含精胺和腐胺等多胺(PA)。在此,我们研究了这些关键的多阳离子分子及其在寄生虫生存中的关键作用。我们的研究表明,抑制或消耗 PA 会显著影响寄生虫的生长和生存能力,尤其是在耐药菌株中。此外,我们还旨在阐明富含 PA 的 Ld-exosomes 对宿主巨噬细胞的影响。数据表明,巨噬细胞能有效内化这些外泌体,从而提高吞噬活性和感染性。此外,内化的Ld-外泌体诱导M2巨噬细胞极化,其特征是精氨酸酶-1的表达和活性升高。溶质载体基因(SLC3A2)表达的增加和细胞内精胺水平的升高表明,Ld-外泌体有助于宿主PAs池,并创造了一种抗炎环境。这些发现凸显了富含 PAs 的 Ld- 外泌体在寄生虫生存和在宿主巨噬细胞中建立有利于寄生虫的环境中的重要作用。
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引用次数: 0
Mycobacterium smegmatis MraZ Regulates Multiple Genes within and Outside of the dcw Operon during Hypoxia. 分枝杆菌 MraZ 在缺氧过程中调控 dcw 操作子内外的多个基因
IF 4 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-18 DOI: 10.1021/acsinfecdis.4c00665
Ismail Mohamed Suleiman, Huang Yu, Junqi Xu, Junfeng Zhen, Hongxiang Xu, Abulimiti Abudukadier, Amina Rafique Hafiza, Jianping Xie

Mycobacterium tuberculosis is the most ancient human tuberculosis pathogen and has been the leading cause of death from bacterial infectious diseases throughout human history. According to the World Health Organization Global Tuberculosis Report, in 2022, 7.5 million new tuberculosis cases were identified, marking the highest number of cases since the World Health Organization initiated its worldwide tuberculosis surveillance program in 1995. The 2019 peak was 7.1 million cases, with 5.8 million cases in 2020 and 6.4 million in 2021. The increase in 2022, which may be attributed to the COVID-19 pandemic complicating tuberculosis case tracing, has raised concerns. To better understand the regulation spectrum of Mycobacterium smegmatis mraZ under hypoxia, we performed a transcriptome analysis of M. smegmatis mutant and wild-type strains using Illumina Agilent 5300 sequencing. The study identified 6898 differentially expressed genes, which were annotated with NCBI nonredundant protein sequences, a manually annotated and reviewed protein sequence database, Pfam, Clusters of Orthologous Groups of Proteins, Gene Ontology, and Kyoto Encyclopedia of Genes and Genomes. Several mycobacteria transcriptional regulators, virulence genes, membrane transporters, and cell wall biosynthesis genes were annotated. These data serve as a valuable resource for future investigations and may offer insight into the development of drugs to combat M. tuberculosis infection.

结核分枝杆菌是最古老的人类结核病病原体,在人类历史上一直是细菌性传染病致死的主要原因。根据世界卫生组织《全球结核病报告》,2022 年新发现的结核病病例为 750 万例,是世界卫生组织自 1995 年启动全球结核病监测项目以来病例数最多的一年。2019 年的峰值为 710 万例,2020 年为 580 万例,2021 年为 640 万例。2022 年病例数的增加可能归因于 COVID-19 大流行使结核病病例追踪变得复杂,这引起了人们的关注。为了更好地了解缺氧条件下分枝杆菌 mraZ 的调控谱,我们利用 Illumina Agilent 5300 测序技术对分枝杆菌突变株和野生型株进行了转录组分析。研究发现了6898个差异表达基因,这些基因通过NCBI非冗余蛋白质序列、人工标注和审查的蛋白质序列数据库、Pfam、蛋白质同源群、基因本体论和京都基因和基因组百科全书进行了注释。其中注释了一些分枝杆菌转录调节因子、毒力基因、膜转运体和细胞壁生物合成基因。这些数据为今后的研究提供了宝贵的资源,并可能为开发抗结核杆菌感染的药物提供启示。
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引用次数: 0
Performance Assessment of ELISA Using the Trypanosoma cruzi-Specific Antigen Tc323 for the Diagnosis of Chronic Chagas Disease. 使用克氏锥虫特异性抗原 Tc323 进行 ELISA 诊断慢性南美锥虫病的性能评估
IF 4 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-16 DOI: 10.1021/acsinfecdis.4c00784
Micaela Soledad Ossowski, Juan Pablo Gallardo, Raul Chadi, Yolanda Hernández, Marisa Fernández, Jorge Diego Marco, Omar Triana-Chavez, Melissa S Nolan, Angelica Pech May, Janine M Ramsey, Juan C Villar, Fernán Agüero, Mariana Potenza, Karina Andrea Gómez

In the chronic phase of Chagas disease (CCD), diagnosis relies on detecting specific IgG antibodies due to the low or absent presence of the parasiteTrypanosoma cruzi in human blood. However, the performance of current serological tests is highly variable, lacking a "gold standard" assay with 100% sensitivity and specificity, which challenges the exploration of new biomarkers. In the present study, we evaluated the diagnostic accuracy of an optimized ELISA using the predicted immunogenic domains (called TcD3 and TcD6) of Tc323, a protein highly conserved among T. cruzi strains but absent in other clinically significant parasites such as Leishmania spp. This study was conducted using plasma or serum samples from CCD individuals with different clinical manifestations and living in endemic regions in Latin America, subjects with unrelated infectious diseases, and noninfected donors. The sensitivity and specificity of recombinant TcD3 were 90.8% and 92.6%, respectively, while rTcD6 displayed values of 93.1% and 93.6% for the same parameters. Area under curve (AUC) values were 0.949 for rTcD3 and 0.954 for rTcD6. The receiver operative characteristic (ROC) curve showed a highly significant difference between CCD individuals and noninfected donors. Cross-reactivity was 10.2% for rTcD3 and 8.2% for rTcD6 in subjects infected with leishmaniasis or with toxoplasmosis. In addition, the reactivity against rTcD3 differed among some geographical areas while no significant difference was found using both domains for the detection of T. cruzi-infected individuals with or without cardiac symptoms. Our findings show that the recombinant antigens rTcD3 and rTcD6 could be used as highly potential biomarkers for the serological diagnosis of CCD.

在南美锥虫病(CCD)的慢性期,由于人体血液中的寄生虫--克鲁兹锥虫(Trypanosoma cruzi)含量较低或不存在,因此诊断依赖于检测特异性 IgG 抗体。然而,目前的血清学检测方法性能参差不齐,缺乏灵敏度和特异性均为 100%的 "金标准 "检测方法,这给探索新的生物标志物带来了挑战。在本研究中,我们评估了使用 Tc323 的预测免疫原性结构域(称为 TcD3 和 TcD6)的优化 ELISA 的诊断准确性,Tc323 是一种在 T. cruzi 菌株中高度保守的蛋白质,但在利什曼原虫等其他具有临床意义的寄生虫中却不存在。 本研究使用了血浆或血清样本,这些样本来自具有不同临床表现、生活在拉丁美洲流行地区的 CCD 患者、患有无关传染病的受试者以及未感染的供体。重组 TcD3 的灵敏度和特异性分别为 90.8% 和 92.6%,而 rTcD6 对相同参数的灵敏度和特异性分别为 93.1% 和 93.6%。rTcD3和rTcD6的曲线下面积(AUC)值分别为0.949和0.954。接受者操作特征(ROC)曲线显示,CCD个体与非感染供体之间存在非常显著的差异。在感染利什曼病或弓形虫的受试者中,rTcD3 和 rTcD6 的交叉反应分别为 10.2% 和 8.2%。此外,一些地区对 rTcD3 的反应性不同,而使用这两个域检测有或无心脏症状的克鲁兹疟原虫感染者则无明显差异。我们的研究结果表明,重组抗原 rTcD3 和 rTcD6 可作为极具潜力的生物标记物用于 CCD 的血清学诊断。
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引用次数: 0
Universal dynamics exposed by interaction quenches 相互作用淬火所揭示的普遍动力学
IF 19.6 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-14 DOI: 10.1038/s41567-024-02704-9
Chandrasekhar Ramanathan

A quantum system prepared in an initial state that is not an eigenstate of its Hamiltonian will exhibit out-of-equilibrium dynamics. These dynamics can span multiple timescales, from the transient response of local correlations to the long-time equilibration of the system. The possibilities seem vast, depending on the initial state, the nature of the interactions and the observables being measured. Reporting in Nature Physics, Yuchen Li and colleagues have observed that the out-of-equilibrium dynamics of local magnetization correlations measured using solid-state nuclear magnetic resonance (NMR) follow a universal form1.

The free induction decay signal records the temporal correlations of the local magnetization following the quench. Previous studies had suggested that the signal should follow a universal form, with the correlations decaying either as a simple exponential (exp(–γt)) or as a damped oscillation (cos(ωt)exp(–γt)) (ref. 3,4). Careful NMR experiments on a wide range of systems, including polycrystalline xenon lattices and calcium fluoride5,6, confirmed such behaviour. Additionally, a second oscillatory decay mode was observed in calcium fluoride7. However, the connection between these universal decays and the parameters of the underlying Hamiltonian remained unclear, limiting the possibility of predicting these universal modes in more general settings.

一个量子系统的初始状态如果不是其哈密顿的特征状态,那么它就会表现出失衡动力学。这些动力学可以跨越多个时间尺度,从局部相关性的瞬时响应到系统的长时间平衡。根据初始状态、相互作用的性质和测量的观测指标,可能性似乎很大。李宇晨及其同事在《自然-物理》(Nature Physics)杂志上报告说,他们观察到使用固态核磁共振(NMR)测量的局部磁化相关性的失衡动态遵循一种普遍形式1。先前的研究表明,该信号应遵循一种普遍形式,相关性衰减为简单指数(exp(-γt))或阻尼振荡(cos(ωt)exp(-γt))(参考文献 3、4)。对包括多晶氙晶格和氟化钙在内的多种系统进行的仔细核磁共振实验5,6 证实了这种行为。此外,在氟化钙中还观察到了第二种振荡衰变模式7。然而,这些普遍衰变与底层哈密顿参数之间的联系仍不清楚,这限制了在更普遍的环境中预测这些普遍模式的可能性。
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引用次数: 0
Eradication of Pseudomonas aeruginosa Persister Cells by Eravacycline. 依拉维辛根除铜绿假单胞菌宿存细胞
IF 4 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-13 DOI: 10.1021/acsinfecdis.4c00349
Sweta Roy, Zeynep S Cakmak, Salma Mahmoud, Mahsa Sadeghzadeh, Guirong Wang, Dacheng Ren

Pseudomonas aeruginosa is a leading bacterial pathogen that causes persistent infections. One major reason that antibiotics fail to clear such infections is the presence of a dormant subpopulation called persister cells. To eradicate persister cells, it is important to change drug development from traditional strategies that focus on growth inhibition to the search for new leads that can kill dormant cells. In this study, we demonstrate that eravacycline can effectively accumulate in P. aeruginosa persister cells, leading to strong killing during wakeup, including persister cells in both planktonic cultures and biofilms of the wild-type strain and its mucoid mutant. The effects of eravacycline on persister control were further validated in vivo using a lung infection model in mice. Collectively, these results demonstrate the possibility to control persister cells of bacterial pathogens by targeting dormancy.

铜绿假单胞菌是导致顽固性感染的主要细菌病原体。抗生素无法清除此类感染的一个主要原因是存在一种叫做顽固细胞的休眠亚群。要根除顽固细胞,就必须改变药物开发策略,从注重抑制生长的传统策略转向寻找能杀死休眠细胞的新线索。在这项研究中,我们证明了麦拉伐环素能有效地在铜绿假单胞菌的宿主细胞中积累,从而在唤醒过程中强力杀灭宿主细胞,包括野生型菌株及其粘液突变体的浮游培养物和生物膜中的宿主细胞。利用小鼠肺部感染模型进一步在体内验证了依拉维辛对控制宿主细胞的作用。总之,这些结果证明了通过靶向休眠来控制细菌病原体宿主细胞的可能性。
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引用次数: 0
A systemic effect for liver senescence 肝脏衰老的系统效应
IF 21.3 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-13 DOI: 10.1038/s41556-024-01520-w
Kuo Du, David Scott Umbaugh, Rajesh Kumar Dutta, Anna Mae Diehl
A study shows that senescence induced in the liver can spread systemically to precipitate multi-organ dysfunction. The work identifies TGFβ signalling as a key mediator of this transmission, suggesting therapeutic avenues to prevent multi-organ failure in severe liver diseases.
一项研究表明,肝脏诱发的衰老可向全身扩散,导致多器官功能障碍。研究发现,TGFβ信号是这种传播的关键介质,这为预防严重肝病的多器官功能衰竭提供了治疗途径。
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引用次数: 0
Nematic fluctuations shape Cooper pairs 向列波动形成库珀对
IF 19.6 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-13 DOI: 10.1038/s41567-024-02693-9
Lingyuan Kong
Experimental evidence of nematic-fluctuation-mediated superconductivity has been observed in an iron-based superconductor near the quantum critical point.
在一种接近量子临界点的铁基超导体中观察到了由向列波动介导的超导现象的实验证据。
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引用次数: 0
Fangchinoline Inhibits Zika Virus by Disrupting Virus Internalization. 方棘霉素通过干扰病毒内化抑制寨卡病毒
IF 4 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-13 DOI: 10.1021/acsinfecdis.4c00600
Shaokang Yang, Xiaotong Yang, Zhuang Wang, Wei Li, Ruiyuan Cao, Wu Zhong

The Zika virus (ZIKV) has garnered significant public attention, particularly following the outbreak in Brazil, due to its potential to cause severe damage to the central nervous system and its ability to cross the placental barrier, resulting in microcephaly in infants. Despite the urgency, there remains a lack of targeted therapies or vaccines for the prevention or treatment of ZIKV infection and its related diseases. Fangchinoline (FAN), an alkaloid derived from traditional Chinese medicinal herbs, has a range of biological activities. In this study, we employed both in vitro and in vivo infection models to demonstrate the efficacy of FAN in inhibiting ZIKV. Our findings indicate that FAN effectively suppresses the replication of ZIKV viral RNA and protein, thereby validating its anti-ZIKV capabilities in living organisms. Further analysis through dosing time assays and infectious inhibition assays revealed that FAN exerts its antiviral effects by impeding the early stages of infection, specifically by inhibiting the internalization of ZIKV. These results underscore the potential of FAN as a candidate for anti-ZIKV drug development and offer novel insights into drug design strategies that target the virus's internalization process.

由于寨卡病毒(ZIKV)可能对中枢神经系统造成严重损害,并能穿过胎盘屏障,导致婴儿小头畸形,因此引起了公众的极大关注,尤其是在巴西寨卡病毒爆发之后。尽管情况紧急,但目前仍缺乏用于预防或治疗 ZIKV 感染及其相关疾病的靶向疗法或疫苗。方胆宁(FAN)是一种从传统中草药中提取的生物碱,具有一系列生物活性。在这项研究中,我们采用了体外和体内感染模型来证明 FAN 在抑制 ZIKV 方面的功效。我们的研究结果表明,FAN 能有效抑制 ZIKV 病毒 RNA 和蛋白的复制,从而验证了其在生物体内抗 ZIKV 的能力。通过剂量时间测定和感染抑制测定进行的进一步分析表明,FAN 是通过阻碍感染的早期阶段,特别是通过抑制 ZIKV 的内化来发挥其抗病毒作用的。这些结果凸显了 FAN 作为抗 ZIKV 药物开发候选物的潜力,并为针对病毒内化过程的药物设计策略提供了新的见解。
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引用次数: 0
Islands identified 确定的岛屿
IF 19.6 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-13 DOI: 10.1038/s41567-024-02670-2
Guosheng Xu, Youwen Sun
Filamentary eruptions from the plasma edge in fusion devices pose a critical threat to their integrity. The identification of magnetic islands at the top of the edge explains how these eruptions are suppressed by resonant magnetic perturbations.
聚变装置等离子体边缘的丝状喷发对其完整性构成了严重威胁。边缘顶部磁岛的识别解释了这些爆发是如何被共振磁扰动所抑制的。
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引用次数: 0
Highly anisotropic superconducting gap near the nematic quantum critical point of FeSe1−xSx FeSe1-xSx 向列量子临界点附近的高各向异性超导间隙
IF 19.6 2区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-11-13 DOI: 10.1038/s41567-024-02683-x
Pranab Kumar Nag, Kirsty Scott, Vanuildo S. de Carvalho, Journey K. Byland, Xinze Yang, Morgan Walker, Aaron G. Greenberg, Peter Klavins, Eduardo Miranda, Adrian Gozar, Valentin Taufour, Rafael M. Fernandes, Eduardo H. da Silva Neto

Nematic phases, in which electrons in a solid spontaneously break rotational symmetry while preserving translational symmetry, exist in several families of unconventional superconductors. Superconductivity mediated by nematic fluctuations is well established theoretically, but it has yet to be unambiguously identified experimentally. One major challenge is that nematicity is often intertwined with other degrees of freedom, such as magnetism and charge order. The FeSe1−xSx family of superconductors provides an opportunity to explore this concept, as it features an isolated nematic phase that can be suppressed by sulfur substitution at a quantum critical point where the nematic fluctuations are the largest. Here we determine the momentum structure of the superconducting gap near the centre of the Brillouin zone in FeSe0.81S0.19—close to the quantum critical point—and find that it is anisotropic and nearly nodal. The gap minima occur in a direction that is rotated 45° with respect to the Fe–Fe direction, unlike the usual isotropic gaps due to spin-mediated pairing in other tetragonal Fe-based superconductors. Instead, we find that the gap structure agrees with theoretical predictions for superconductivity mediated by nematic fluctuations, indicating a change in the pairing mechanism across the phase diagram of FeSe1−xSx.

向列相是指固体中的电子在保持平移对称性的同时自发地打破旋转对称性,存在于多个非常规超导体系列中。由向列波动介导的超导电性在理论上已经得到了很好的证实,但在实验中仍有待明确确定。一个主要挑战是向列性往往与其他自由度(如磁性和电荷秩序)交织在一起。FeSe1-xSx 系列超导体为探索这一概念提供了一个机会,因为它具有孤立的向列相,可以通过在向列波动最大的量子临界点进行硫替代来抑制向列相。在这里,我们确定了 FeSe0.81S0.19 中布里渊区中心附近--接近量子临界点--超导间隙的动量结构,并发现它是各向异性的,几乎是结点结构。间隙最小值出现在一个相对于铁-铁方向旋转 45° 的方向上,这与其他四方铁基超导体中由于自旋介导配对而产生的通常各向同性间隙不同。相反,我们发现间隙结构与理论预测的由向列波动介导的超导性一致,这表明 FeSe1-xSx 相图中的配对机制发生了变化。
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引用次数: 0
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ACS Infectious Diseases
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