Dihedral–torsion model potentials that include angle-damping factors†

IF 3.9 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY RSC Advances Pub Date : 2025-03-07 DOI:10.1039/D4RA08960J
Thomas A. Manz
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Abstract

This groundbreaking study derives and tests several new dihedral torsion model potentials for constructing classical forcefields for atomistic simulations of materials. (1) The new angle-damped dihedral torsion (ADDT) model potential is preferred when neither contained equilibrium bond angle is linear (i.e., (θeqABC and θeqBCD) ≠ 180°), at least one of the contained equilibrium bond angles is ≥ 130° (i.e., (θeqABC or θeqBCD) ≥ 130°), and the dihedral torsion potential contains some odd-function contributions (i.e., U[ϕ] ≠ U[−ϕ]). (2) The new angle-damped cosine only (ADCO) model potential is preferred when neither contained equilibrium bond angle is linear (i.e., (θeqABC and θeqBCD) ≠180°), at least one of the contained equilibrium bond angles is ≥ 130° (i.e., (θeqABC or θeqBCD) ≥ 130°), and the dihedral torsion potential contains no odd-function contributions (i.e., U[ϕ] = U[−ϕ]). (3) The new constant amplitude dihedral torsion (CADT) model potential is preferred when neither contained equilibrium bond angle is linear (i.e., (θeqABC and θeqBCD) ≠ 180°), both contained equilibrium bond angles are <130° (i.e., (θeqABC and θeqBCD) < 130°), and the dihedral torsion potential contains some odd-function contributions (i.e., U[ϕ] ≠ U[−ϕ]). (4) The constant amplitude cosine only (CACO) model potential is preferred when neither contained equilibrium bond angle is linear (i.e., (θeqABC and θeqBCD) ≠180°), both contained equilibrium bond angles are <130° (i.e., (θeqABC and θeqBCD) <130°), and the dihedral torsion potential contains no odd-function contributions (i.e., U[ϕ] = U[−ϕ]). (5) The new angle-damped linear dihedral (ADLD) model potential is preferred when at least one contained equilibrium bond angle is linear (i.e., (θeqABC or θeqBCD) = 180°). Most importantly, this article derives combined angle-dihedral coordinate branch equivalency conditions and angle-damping factors that ensure the angle-damped torsion model potentials (e.g., ADDT, ADCO, and ADLD) are mathematically consistent and continuously differentiable even as at least one contained bond angle approaches linearity (i.e., as (θABC or θBCD) → 180°). This article introduces the torsion offset potential (TOP). I show the TOP gives rise in some materials to the unusual physical phenomenon of slip torsion. For various molecules, extensive quantitative comparisons to high-level quantum chemistry calculations (e.g., CCSD) and experimental vibrational frequencies showed these new dihedral torsion model potentials perform superbly.

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这项开创性的研究推导并测试了几种新的二重扭转模型势,用于构建经典力场,用于材料的原子模拟。(1) 当所包含的平衡键角都不是线性的(即θeqABC 和θeqBCD)时,新的角度阻尼二重扭转(ADDT)模型势能更受青睐、(θeqABC 和 θeqBCD) ≠ 180°),所含平衡键角中至少有一个角度≥ 130°(即 (θeqABC 或 θeqBCD) ≥ 130°),且二面扭转势包含一些奇函数贡献(即 U[ϕ] ≠ U[-j])时,优先选择新的角度阻尼二面扭转(ADDT)模型势。(2) 当所含平衡键角都不是线性的(即(θeqABC 和 θeqBCD) ≠180°),所包含的平衡键角中至少有一个角度≥130°(即 (θeqABC 或 θeqBCD) ≥130°),且二面扭转势不包含奇函数贡献(即 U[ϕ] = U[-j])时,优先选择新的仅角度阻尼余弦(ADCO)模型势。(3) 当所包含的平衡键角都不是线性的(即(θeqABC 和 θeqBCD) ≠ 180°),所含平衡键角均为 <130°(即 (θeqABC 和 θeqBCD) <130°),且二面扭转势包含一些奇函数贡献(即 U[ϕ] ≠ U[-j])时,新的恒定振幅二面扭转(CADT)模型势更受欢迎。(4) 当所包含的平衡键角都不是线性的(即(θeqABC 和 θeqBCD) ≠180°),所含平衡键角均为 <130°(即 (θeqABC 和 θeqBCD) <130°),且二面扭转势不包含奇函数贡献(即 U[ϕ] = U[-j])时,首选 CACO 模型势。(5) 当至少一个包含的平衡键角是线性的(即 (θeqABC 或 θeqBCD) = 180°)时,新的角度阻尼线性二面体(ADLD)模型势能更受青睐。最重要的是,本文推导出了角度-二面体坐标分支组合等价条件和角度阻尼系数,确保角度阻尼扭转模型电位(如 ADDT、ADCO 和 ADLD)在数学上保持一致,即使至少一个包含的键角接近线性(即 (θABC 或 θBCD) → 180°)时也是连续可微的。本文介绍了扭转偏移势(TOP)。我的研究表明,在某些材料中,扭转偏移势会导致滑移扭转这种不寻常的物理现象。对于各种分子,与高水平量子化学计算(如 CCSD)和实验振动频率的广泛定量比较表明,这些新的二面扭转模型势能表现出色。
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来源期刊
RSC Advances
RSC Advances chemical sciences-
CiteScore
7.50
自引率
2.60%
发文量
3116
审稿时长
1.6 months
期刊介绍: An international, peer-reviewed journal covering all of the chemical sciences, including multidisciplinary and emerging areas. RSC Advances is a gold open access journal allowing researchers free access to research articles, and offering an affordable open access publishing option for authors around the world.
期刊最新文献
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