A deep error correction network for compressed sensing MRI.

BMC biomedical engineering Pub Date : 2020-02-27 eCollection Date: 2020-01-01 DOI:10.1186/s42490-020-0037-5
Liyan Sun, Yawen Wu, Zhiwen Fan, Xinghao Ding, Yue Huang, John Paisley
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引用次数: 10

Abstract

Background: CS-MRI (compressed sensing for magnetic resonance imaging) exploits image sparsity properties to reconstruct MRI from very few Fourier k-space measurements. Due to imperfect modelings in the inverse imaging, state-of-the-art CS-MRI methods tend to leave structural reconstruction errors. Compensating such errors in the reconstruction could help further improve the reconstruction quality.

Results: In this work, we propose a DECN (deep error correction network) for CS-MRI. The DECN model consists of three parts, which we refer to as modules: a guide, or template, module, an error correction module, and a data fidelity module. Existing CS-MRI algorithms can serve as the template module for guiding the reconstruction. Using this template as a guide, the error correction module learns a CNN (convolutional neural network) to map the k-space data in a way that adjusts for the reconstruction error of the template image. We propose a deep error correction network. Our experimental results show the proposed DECN CS-MRI reconstruction framework can considerably improve upon existing inversion algorithms by supplementing with an error-correcting CNN.

Conclusions: In the proposed a deep error correction framework, any off-the-shelf CS-MRI algorithm can be used as template generation. Then a deep neural network is used to compensate reconstruction errors. The promising experimental results validate the effectiveness and utility of the proposed framework.

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压缩感知MRI的深度误差校正网络。
背景:CS-MRI(磁共振成像压缩感知)利用图像稀疏性从很少的傅里叶k空间测量中重建MRI。由于逆成像建模不完善,最先进的CS-MRI方法往往会留下结构重建误差。在重建过程中对这些误差进行补偿,有助于进一步提高重建质量。结果:在这项工作中,我们提出了一个用于CS-MRI的DECN(深度误差校正网络)。DECN模型由三个部分组成,我们将其称为模块:指南或模板、模块、错误校正模块和数据保真度模块。现有的CS-MRI算法可以作为指导重建的模板模块。以该模板为指导,误差校正模块学习CNN(卷积神经网络)以一种调整模板图像重建误差的方式映射k空间数据。我们提出了一种深度纠错网络。我们的实验结果表明,我们提出的DECN CS-MRI重构框架通过补充一个纠错CNN,可以大大改进现有的反演算法。结论:在提出的深度纠错框架中,任何现成的CS-MRI算法都可以作为模板生成。然后利用深度神经网络对重构误差进行补偿。实验结果验证了该框架的有效性和实用性。
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