Genotypes diversity of env gene of Bovine leukemia virus in Western Siberia.

IF 2.9 Q2 Biochemistry, Genetics and Molecular Biology BMC Genetics Pub Date : 2020-10-22 DOI:10.1186/s12863-020-00874-y
Natalia Blazhko, Sultan Vyshegurov, Alexander Donchenko, Kirill Shatokhin, Valeria Ryabinina, Kirill Plotnikov, Alevtina Khodakova, Sergey Pashkovskiy
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引用次数: 3

Abstract

Background: This study describes the biodiversity and properties of Bovine leukemia virus in Western Siberia. This paper explores the effect of different genotypes of the env gene of the cattle leukemia virus on hematological parameters of infected animals. The researchers focused on exploring the polymorphism of the env gene and, in doing so, discovered the new genotypes Ia and Ib, which differ from genotype I. Several hypotheses on the origin of the different genotypes in Siberia are discussed.

Results: We obtained varying length of the restriction fragments for genotypes I. Additionally using restrictase Hae III were received fragments was named genotype Ia, and genotype Ib. There are 2.57 ± 0.55% (20 out of 779) samples of genotype Ib which does not differ significantly from 1% (χ2 = 2.46). Other genotypes were observed in the cattle of Siberia as wild type genotypes (their frequency varied from 17.84 to 32.73%). The maximum viral load was observed in animals with the II and IV viral genotypes (1000-1400 viral particles per 1000 healthy cells), and the minimum viral load was observed animals with genotype Ib (from 700 to 900 viral particles per 1000 healthy cells).

Conclusions: The probability of the direct introduction of genotype II from South America to Siberia is extremely small and it is more likely that the strain originated independently in an autonomous population with its distribution also occurring independently. A new variety of genotype I (Ib) was found, which can be both a neoplasm and a relict strain.

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西伯利亚西部牛白血病病毒env基因型多样性研究
背景:本研究描述了西伯利亚西部牛白血病病毒的生物多样性和特性。本文探讨了牛白血病病毒env基因不同基因型对感染动物血液学指标的影响。研究人员重点研究了env基因的多态性,并在此过程中发现了不同于基因型i的新基因型Ia和Ib,讨论了西伯利亚不同基因型起源的几种假设。结果:我们获得了不同长度的基因i型限制性内切酶片段。另外,利用限制性内切酶Hae III获得的片段被命名为基因Ia型和基因Ib型,其中基因Ib型的样本为2.57±0.55%(779个样本中有20个),与1%差异无统计学意义(χ2 = 2.46)。西伯利亚牛的其他基因型为野生型基因型(频率在17.84 ~ 32.73%之间)。在II和IV型病毒基因型动物中观察到最大病毒载量(每1000个健康细胞中有1000-1400个病毒颗粒),而在Ib基因型动物中观察到最小病毒载量(每1000个健康细胞中有700 - 900个病毒颗粒)。结论:基因型从南美直接传入西伯利亚的可能性极小,更有可能是菌株独立起源于一个自治人群,其分布也独立发生。发现了一个基因型I (Ib)的新变种,它既可能是肿瘤,也可能是残株。
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来源期刊
BMC Genetics
BMC Genetics 生物-遗传学
CiteScore
4.30
自引率
0.00%
发文量
77
审稿时长
4-8 weeks
期刊介绍: BMC Genetics is an open access, peer-reviewed journal that considers articles on all aspects of inheritance and variation in individuals and among populations.
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