Dual Uncertainty-Guided Mixing Consistency for Semi-Supervised 3D Medical Image Segmentation

IF 7.5 3区 计算机科学 Q1 COMPUTER SCIENCE, INFORMATION SYSTEMS IEEE Transactions on Big Data Pub Date : 2023-03-17 DOI:10.1109/TBDATA.2023.3258643
Chenchu Xu;Yuan Yang;Zhiqiang Xia;Boyan Wang;Dong Zhang;Yanping Zhang;Shu Zhao
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引用次数: 7

Abstract

3D semi-supervised medical image segmentation is extremely essential in computer-aided diagnosis, which can reduce the time-consuming task of performing annotation. The challenges with current 3D semi-supervised segmentation algorithms includes the methods, limited attention to volume-wise context information, their inability to generate accurate pseudo labels and a failure to capture important details during data augmentation. This article proposes a dual uncertainty-guided mixing consistency network for accurate 3D semi-supervised segmentation, which can solve the above challenges. The proposed network consists of a Contrastive Training Module which improves the quality of augmented images by retaining the invariance of data augmentation between original data and their augmentations. The Dual Uncertainty Strategy calculates dual uncertainty between two different models to select a more confident area for subsequent segmentation. The Mixing Volume Consistency Module that guides the consistency between mixing before and after segmentation for final segmentation, uses dual uncertainty and can fully learn volume-wise context information. Results from evaluative experiments on brain tumor and left atrial segmentation shows that the proposed method outperforms state-of-the-art 3D semi-supervised methods as confirmed by quantitative and qualitative analysis on datasets. This effectively demonstrates that this study has the potential to become a medical tool for accurate segmentation. Code is available at: https://github.com/yang6277/DUMC .
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半监督三维医学图像分割的双不确定度混合一致性
三维半监督医学图像分割在计算机辅助诊断中至关重要,可以减少耗时的注释任务。当前的3D半监督分割算法面临的挑战包括方法、对体积上下文信息的关注有限、无法生成准确的伪标签以及无法在数据增强过程中捕捉重要细节。本文提出了一种用于精确三维半监督分割的双不确定性引导混合一致性网络,可以解决上述挑战。所提出的网络由对比训练模块组成,该模块通过保持原始数据与其增强之间的数据增强不变性来提高增强图像的质量。双重不确定性策略计算两个不同模型之间的双重不确定性,以选择一个更有信心的区域进行后续分割。混合体积一致性模块指导分割前后混合的一致性,以进行最终分割,使用双重不确定性,并可以完全学习体积上下文信息。脑肿瘤和左心房分割的评估实验结果表明,通过对数据集的定量和定性分析,所提出的方法优于最先进的3D半监督方法。这有效地证明了这项研究有潜力成为精确分割的医疗工具。代码位于:https://github.com/yang6277/DUMC.
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来源期刊
CiteScore
11.80
自引率
2.80%
发文量
114
期刊介绍: The IEEE Transactions on Big Data publishes peer-reviewed articles focusing on big data. These articles present innovative research ideas and application results across disciplines, including novel theories, algorithms, and applications. Research areas cover a wide range, such as big data analytics, visualization, curation, management, semantics, infrastructure, standards, performance analysis, intelligence extraction, scientific discovery, security, privacy, and legal issues specific to big data. The journal also prioritizes applications of big data in fields generating massive datasets.
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