Probing the binding of morin with alpha-2-macroglobulin using multi-spectroscopic and molecular docking approach

IF 1.8 4区 生物学 Q3 BIOPHYSICS Journal of Biological Physics Pub Date : 2023-03-13 DOI:10.1007/s10867-023-09629-z
Sana Ansari, Mohammad Khalid Zia, Shamila Fatima, Haseeb Ahsan, Fahim H. Khan
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引用次数: 1

Abstract

Alpha-2-macroglobulin (α2M) is an essential antiproteinase that is widely distributed in human plasma. The present study was aimed at investigating the binding of a potential therapeutic dietary flavonol, morin, with human α2M using a multi-spectroscopic and molecular docking approach. Recently, flavonoid-protein interaction has gained significant attention, because a majority of dietary bioactive components interact with proteins, thereby altering their structure and function. The results of the activity assay exhibited a 48% reduction in the antiproteolytic potential of α2M upon interaction with morin. Fluorescence quenching tests unequivocally confirmed quenching in the fluorescence of α2M in the presence of morin, conforming complex formation and demonstrating that the binding mechanism involves a dynamic mode of interaction. Synchronous fluorescence spectra of α2M with morin showed perturbation in the microenvironment around tryptophan residues. Furthermore, structural changes were observed through CD and FT-IR, showing alterations in the secondary structure of α2M induced by morin. FRET further supports the results of the dynamic mode of quenching. Moderate interaction is shown by binding constant values using Stern–Volmer’s fluorescence spectroscopy. Morin binds to α2M at 298 K with a binding constant of 2.7 × 104 M−1, indicating the strength of the association. The α2M-morin system was found to have negative ΔG values, which suggests that the binding process was spontaneous. Molecular docking also reveals the different amino acid residues involved in this binding process, revealing that the binding energy is -8.1 kcal/mol.

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利用多光谱和分子对接方法探测桑苷与α -2巨球蛋白的结合
α -2巨球蛋白(α2M)是广泛存在于人血浆中的一种必需的抗蛋白酶。本研究旨在利用多光谱和分子对接方法研究一种具有潜在治疗作用的膳食黄酮醇桑里苷与人α2M的结合。近年来,类黄酮与蛋白质的相互作用引起了人们的广泛关注,因为大多数膳食生物活性成分与蛋白质相互作用,从而改变了蛋白质的结构和功能。活性测定结果显示,与桑里素相互作用后,α2M的抗蛋白水解能力降低48%。荧光猝灭实验明确证实了桑苷存在时α2M的荧光猝灭,符合配合物的形成,表明其结合机制涉及一个动态的相互作用模式。在色氨酸残基周围的微环境中,桑精α - 2m的同步荧光光谱显示出扰动。此外,通过CD和FT-IR观察到α2M的结构变化,表明桑精诱导α2M二级结构发生改变。FRET进一步支持动态淬火模式的结果。用斯特恩-沃尔默荧光光谱法通过结合常数值显示了适度的相互作用。Morin在298 K时与α2M结合,结合常数为2.7 × 104 M−1,表明其结合强度。α2M-morin体系的ΔG值为负值,表明其结合过程是自发的。分子对接还揭示了参与该结合过程的不同氨基酸残基,揭示了结合能为-8.1 kcal/mol。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Biological Physics
Journal of Biological Physics 生物-生物物理
CiteScore
3.00
自引率
5.60%
发文量
20
审稿时长
>12 weeks
期刊介绍: Many physicists are turning their attention to domains that were not traditionally part of physics and are applying the sophisticated tools of theoretical, computational and experimental physics to investigate biological processes, systems and materials. The Journal of Biological Physics provides a medium where this growing community of scientists can publish its results and discuss its aims and methods. It welcomes papers which use the tools of physics in an innovative way to study biological problems, as well as research aimed at providing a better understanding of the physical principles underlying biological processes.
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