Reduced-dose and high-speed acquisition strategies for multi-dimensional electron microscopy

Zineb Saghi, Martin Benning, Rowan Leary, Manuel Macias-Montero, Ana Borras, Paul A Midgley
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引用次数: 41

Abstract

Multi-dimensional electron microscopy has recently gained considerable interest thanks to the advent of microscopes with unprecedented analytical and in situ capabilities. These information-rich imaging modes, though, are often subject to long acquisition times and large data generation. In this paper, we explore novel acquisition strategies and reconstruction algorithms to retrieve reliable reconstructions from datasets that are limited in terms of both per image and tilt series angular sampling. We show that inpainting techniques are capable of restoring scanning transmission electron microscopy images in which a very restricted number of pixels are scanned, while compressed sensing tomographic reconstruction is capable of minimising artefacts due to angular subsampling. An example of robust reconstruction from data constituting a dose reduction of 10× is presented, using an organic/inorganic core-shell nanowire as a test sample. The combination of these novel acquisition schemes and image recovery strategies provides new avenues to reduced-dose and high-speed imaging.

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多维电子显微镜的低剂量和高速采集策略
由于具有前所未有的分析和原位能力的显微镜的出现,多维电子显微镜最近获得了相当大的兴趣。然而,这些信息丰富的成像模式往往需要较长的采集时间和大量的数据生成。在本文中,我们探索了新的采集策略和重建算法,以从数据集中检索可靠的重建,这些数据集在每张图像和倾斜序列角度采样方面都是有限的。我们表明,图像修复技术能够恢复扫描透射电子显微镜图像,其中扫描的像素数量非常有限,而压缩感知层析成像重建能够最大限度地减少由于角次采样造成的伪影。本文提出了一个使用有机/无机核壳纳米线作为测试样本,从构成剂量减少10倍的数据进行鲁棒重建的例子。这些新的采集方案和图像恢复策略的结合为低剂量和高速成像提供了新的途径。
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Advanced Structural and Chemical Imaging
Advanced Structural and Chemical Imaging Medicine-Radiology, Nuclear Medicine and Imaging
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