Therapeutic capability of selected medicinal plants' bioactive constituents against the mutant ovarian TP53 gene; a computational approach

Kayode Yomi Raheem , Fawehinmi Praise Ibukunoluwa , Solomon Ayodele Olorundare , Jairus Olumasai Nandwa , Modinat Aina Abayomi , Egbe Justine Uchechukwu , Mary Adewunmi , Kuyet Zichat Blessing , Modupe Mercy Anthony , Mary Ikeoluwa Gbadebo , Falana Taiwo Daniel
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引用次数: 2

Abstract

Background

A mutant P53 protein plays such a crucial role in ovarian cancer, and natural compounds have been known to be effective in treating cancer. The current study was conducted to discover new mutant P53 modulators in plants used for medicinal purposes. The mutant p53 3D structure was built using homology modeling, while its active binding domain was predicted using Findsitecom2.0. Docking studies were conducted with ligands derived from bioactive components of seven different plants and mutant p53 binding sites. Autodocking programs, including Discovery Studio and PyRx, were used to obtain the docking protein and its intricate visual representation. Gemcitabine and thiotepa were the reference drugs. Acute RAT toxicity and Pharmacokinetic properties were utilized in Gusar and SWISSADME, respectively, to narrow down the hit compounds to those with the highest binding affinities. Using the density functional theory (DFT) method, the electronic properties of the bioactive constituents were determined. 15 of the 50 bioactive phytochemicals displayed superior mutant p53 binding energies compared to Gemcitabine and Thioteba (−5.4 and −3.5 binding scores, respectively). Considering acute toxicity predictions and pharmacokinetics, 10-hydroxycamptothecin, irinotecan, morusin, and rubitecan were the four major compounds with low toxicity. DFT calculations uncovered regions susceptible to nucleophilic and electrophilic assaults. The study sought to identify potential drug candidates for modulating mutant P53 in ovarian cancer treatment.

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部分药用植物活性成分对卵巢突变型TP53基因的治疗作用计算方法
突变的P53蛋白在卵巢癌中起着至关重要的作用,并且已知天然化合物对治疗癌症有效。目前的研究是为了在药用植物中发现新的突变型P53调节剂。利用同源性建模构建突变体p53的3D结构,利用Findsitecom2.0预测其活性结合域。对接研究采用来自7种不同植物的生物活性成分和突变p53结合位点的配体进行。包括Discovery Studio和PyRx在内的自动对接程序用于获得对接蛋白及其复杂的视觉表示。吉西他滨和硫替帕为对照药物。分别利用Gusar和SWISSADME的急性大鼠毒性和药代动力学特性,将靶向化合物范围缩小到具有最高结合亲和力的化合物。利用密度泛函理论(DFT)方法测定了生物活性成分的电子性质。与吉西他滨和硫替巴相比,50种生物活性植物化学物质中有15种显示出更高的p53突变体结合能(分别为- 5.4和- 3.5)。考虑到急性毒性预测和药代动力学,10-羟基喜树碱、伊立替康、morusin和rubitecan是四种主要的低毒性化合物。DFT计算揭示了易受亲核和亲电攻击的区域。该研究旨在确定卵巢癌治疗中调节P53突变体的潜在候选药物。
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Advances in biomarker sciences and technology
Advances in biomarker sciences and technology Biotechnology, Clinical Biochemistry, Molecular Medicine, Public Health and Health Policy
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20 weeks
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