Identification of a type I interferon (IFN) gene from Japanese eel and its expression analysis in vivo and in vitro

Q1 Agricultural and Biological Sciences Agri Gene Pub Date : 2017-09-01 DOI:10.1016/j.aggene.2017.07.003
Jianjun Feng , Peng Lin , Yilei Wang , Songlin Guo , Ziping Zhang , Lili Yu
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引用次数: 5

Abstract

Type I interferon (IFN) is a key cytokine of innate immune response for viral infection in teleost fish. In present study we report the identification of a type I IFN gene (AjIFN) from Japanese eel (Anguilla japonica) and provide evidence that AjIFN has been involved in Japanese eel host response against not only the virus but also the bacterial infection. The full-length cDNA of AjIFN (826 bp) has an ORF of 531 bp. The analysis of NCBI CDD showed that the AjIFN protein had the typical conserved domains, including IFabd conserved domain, and two conserved cysteine residues potentially forming disulphide bridges. Based on the phylogenetic analysis, AjIFN was classified into type I IFNs families belonging to the subgroup-a of the 2Cys group. In vivo, the AjIFN expressions in liver and kidney were induced following injection with LPS, the viral mimic poly I:C, and Aeromonas hydrophila infection. In vitro, the AjIFN transcripts of Japanese eel liver cells were enhanced by LPS, poly I:C and CpG-DNA stimulation and no change of the expression level was found post PGN treatment. Following A. hydrophila infection, the low concentration of 1 × 106 cfu/mL failed to induce the expression of AjIFN whereas the concentration of 1 × 107 cfu/mL and 1 × 108 cfu/mL successfully induced the expression of AjIFN. These results collectively suggested AjIFN is an inducible gene possibly involved in Japanese eel defense against viral and bacterial infection.

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日本鳗鲡ⅰ型干扰素(IFN)基因的鉴定及体内外表达分析
I型干扰素(IFN)是硬骨鱼对病毒感染的先天免疫应答的关键细胞因子。在本研究中,我们从日本鳗鲡(Anguilla japonica)中鉴定出一个I型IFN基因(AjIFN),并提供证据表明AjIFN不仅参与了日本鳗鲡宿主对病毒和细菌感染的反应。AjIFN全长cDNA (826 bp)的ORF为531 bp。NCBI CDD分析表明,AjIFN蛋白具有典型的保守结构域,包括IFabd保守结构域和两个可能形成二硫桥的保守半胱氨酸残基。基于系统发育分析,将AjIFN划分为属于2Cys类群a亚群的I型ifn家族。在体内,注射LPS、病毒模拟物poly I:C和嗜水气单胞菌感染后,诱导肝脏和肾脏中AjIFN的表达。在体外,LPS、poly I:C和CpG-DNA刺激可增强日本鳗鲡肝细胞AjIFN转录本的表达,PGN处理后,AjIFN的表达水平未见变化。在嗜水单胞菌感染后,低浓度1 × 106 cfu/mL不能诱导AjIFN的表达,而1 × 107 cfu/mL和1 × 108 cfu/mL能诱导AjIFN的表达。这些结果表明AjIFN是一个诱导基因,可能参与了日本鳗鲡对病毒和细菌感染的防御。
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来源期刊
Agri Gene
Agri Gene Agricultural and Biological Sciences-Agricultural and Biological Sciences (miscellaneous)
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期刊介绍: Agri Gene publishes papers that focus on the regulation, expression, function and evolution of genes in crop plants, farm animals, and agriculturally important insects and microorganisms. Agri Gene strives to be a diverse journal and topics in multiple fields will be considered for publication so long as their main focus is on agriculturally important organisms (plants, animals, insects, or microorganisms). Although not limited to the following, some examples of potential topics include: Gene discovery and characterization. Genetic markers to guide traditional breeding. Genetic effects of transposable elements. Evolutionary genetics, molecular evolution, population genetics, and phylogenetics. Profiling of gene expression and genetic variation. Biotechnology and crop or livestock improvement. Genetic improvement of biological control microorganisms. Genetic control of secondary metabolic pathways and metabolic enzymes of crop pathogens. Transcription analysis of beneficial or pest insect developmental stages Agri Gene encourages submission of novel manuscripts that present a reasonable level of analysis, functional relevance and/or mechanistic insight. Agri Gene also welcomes papers that have predominantly a descriptive component but improve the essential basis of knowledge for subsequent functional studies, or which provide important confirmation of recently published discoveries provided that the information is new.
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