Integrating oscillator-based circadian clocks with crop growth simulations

IF 2.6 Q1 AGRONOMY in silico Plants Pub Date : 2021-01-01 DOI:10.1093/INSILICOPLANTS/DIAB016
E. Lochocki, J. McGrath
{"title":"Integrating oscillator-based circadian clocks with crop growth simulations","authors":"E. Lochocki, J. McGrath","doi":"10.1093/INSILICOPLANTS/DIAB016","DOIUrl":null,"url":null,"abstract":"\n Circadian rhythms play critical roles in plant physiology, growth, development and survival, and their inclusion in crop growth models is essential for high-fidelity results, especially when considering climate change. Commonly used circadian clock models are often inflexible or result in complex outputs, limiting their use in general simulations. Here we present a new circadian clock model based on mathematical oscillators that easily adapts to different environmental conditions and produces intuitive outputs. We then demonstrate its utility as an input to Glycine max development models. This oscillator clock model has the power to simplify the inclusion of circadian cycles and photoperiodic effects in crop growth models and to unify experimental data from field and controlled environment observations.","PeriodicalId":36138,"journal":{"name":"in silico Plants","volume":" ","pages":""},"PeriodicalIF":2.6000,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1093/INSILICOPLANTS/DIAB016","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"in silico Plants","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1093/INSILICOPLANTS/DIAB016","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"AGRONOMY","Score":null,"Total":0}
引用次数: 1

Abstract

Circadian rhythms play critical roles in plant physiology, growth, development and survival, and their inclusion in crop growth models is essential for high-fidelity results, especially when considering climate change. Commonly used circadian clock models are often inflexible or result in complex outputs, limiting their use in general simulations. Here we present a new circadian clock model based on mathematical oscillators that easily adapts to different environmental conditions and produces intuitive outputs. We then demonstrate its utility as an input to Glycine max development models. This oscillator clock model has the power to simplify the inclusion of circadian cycles and photoperiodic effects in crop growth models and to unify experimental data from field and controlled environment observations.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
将基于振荡器的生物钟与作物生长模拟相结合
昼夜节律在植物生理、生长、发育和生存中发挥着关键作用,将其纳入作物生长模型对于高保真度的结果至关重要,尤其是在考虑气候变化时。常用的昼夜节律时钟模型通常是不灵活的,或者导致复杂的输出,限制了它们在一般模拟中的使用。在这里,我们提出了一种基于数学振荡器的新的昼夜节律时钟模型,该模型可以轻松适应不同的环境条件并产生直观的输出。然后,我们展示了它作为Glycine max开发模型输入的效用。这种振荡时钟模型能够简化作物生长模型中昼夜节律和光周期效应的包含,并统一来自田间和受控环境观测的实验数据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
in silico Plants
in silico Plants Agricultural and Biological Sciences-Agronomy and Crop Science
CiteScore
4.70
自引率
9.70%
发文量
21
审稿时长
10 weeks
期刊最新文献
Model-based inference of a dual role for HOPS in regulating guard cell vacuole fusion. Playing a crop simulation model using symbols and sounds: the ‘mandala’ A Scalable Pipeline to Create Synthetic Datasets from Functional-Structural Plant Models for Deep Learning In a PICKLE: A gold standard entity and relation corpus for the molecular plant sciences A comparison of empirical and mechanistic models for wheat yield prediction at field level in Moroccan rainfed areas
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1