DNA barcoding and microsatellite marker development for Nyctibatrachus major: the threatened amphibian species

Q2 Medicine In Silico Biology Pub Date : 2010-02-15 DOI:10.1145/1722024.1722029
K. Meenakshi, R. Remya, G. Sanil
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引用次数: 5

Abstract

Identifying species of organisms by using molecular and bioinformatics tools has been in the center of ongoing discussions on the conservation genetics field. The resolution of taxonomic uncertainties is a necessary step to distinguish entities for conservation purposes. In an effort to contribute to resolving this taxonomic uncertainty and to assess the genetic population structure of the taxon Nyctibatrachus major, we barcoded COI gene for species identification and also developed species specific primers for microsatellite markers to assess the population dynamics among Nyctibatrachus major population. The current work is a part of the ongoing programs on the conservation genetics of endemic fauna of Western Ghats.
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两栖濒危物种大鲵DNA条形码及微卫星标记的开发
利用分子和生物信息学工具鉴定生物物种一直是保护遗传学领域讨论的焦点。解决分类上的不确定性是为了保护目的而区分实体的必要步骤。为了解决这一分类学上的不确定性,并对大夜蛾分类单元的遗传群体结构进行评估,我们对COI基因进行了条形码鉴定,并开发了物种特异性引物用于微卫星标记,以评估大夜蛾种群间的种群动态。目前的工作是正在进行的西高止山脉特有动物遗传保护计划的一部分。
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来源期刊
In Silico Biology
In Silico Biology Computer Science-Computational Theory and Mathematics
CiteScore
2.20
自引率
0.00%
发文量
1
期刊介绍: The considerable "algorithmic complexity" of biological systems requires a huge amount of detailed information for their complete description. Although far from being complete, the overwhelming quantity of small pieces of information gathered for all kind of biological systems at the molecular and cellular level requires computational tools to be adequately stored and interpreted. Interpretation of data means to abstract them as much as allowed to provide a systematic, an integrative view of biology. Most of the presently available scientific journals focus either on accumulating more data from elaborate experimental approaches, or on presenting new algorithms for the interpretation of these data. Both approaches are meritorious.
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