A logic integrated optimal pin-count design for digital microfluidic biochips

Trung Anh Dinh, S. Yamashita, Tsung-Yi Ho
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引用次数: 9

Abstract

Digital microfluidic biochips have become one of the most promising technologies for biomedical experiments. In modern microfluidic technology, reducing the number of independent control pins that reflects most of the fabrication cost, power consumption and reliability of a microfluidic system, is a key challenge for every digital microfluidic biochip design. However, all the previous chip designs sacrifice the optimality of the problem, and only limited reduction on the number of control pins is observed. Moreover, most existing designs cannot satisfy high-throughput demand for bioassays, and thus inapplicable in practical contexts. In this paper, we propose the first optimal pin-count design scheme for digital microfluidic biochips. By integrating a very simple combinational logic circuit into the original chip, the proposed scheme can provide high-throughput for bioassays with an information-theoretic minimum number of control pins. Furthermore, to cope with the rapid growth of the chip's scale, we also propose a scalable and efficient heuristics. Experiments demonstrate that the proposed scheme can obtain much fewer number of control pins compared with the previous state-of-the-art works.
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数字微流控生物芯片的逻辑集成最佳引脚数设计
数字微流控生物芯片已成为生物医学实验中最具发展前景的技术之一。在现代微流控技术中,减少独立控制引脚的数量反映了微流控系统的大部分制造成本、功耗和可靠性,是每个数字微流控生物芯片设计的关键挑战。然而,所有先前的芯片设计都牺牲了问题的最优性,并且只观察到控制引脚数量的有限减少。此外,大多数现有设计不能满足生物测定的高通量需求,因此在实际环境中不适用。在本文中,我们提出了数字微流控生物芯片的第一个最佳引脚数设计方案。通过将一个非常简单的组合逻辑电路集成到原始芯片中,该方案可以在信息论的最小控制引脚数量下提供高通量的生物分析。此外,为了应对芯片规模的快速增长,我们还提出了一种可扩展的高效启发式算法。实验表明,与现有方法相比,该方法可获得更少的控制引脚数。
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