Evaluating etiological significance of Enterococcus faecalis isolated from children with urinary tract infection

T. S. Komenkova, E. Zaitseva
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Abstract

Aim. To conduct comprehensive evaluation of microbiological properties of Enterococcus faecalis, isolated from urine in children with urinary system infections (UTI), to determine their etiological significance.Materials and methods. The study employed clinical isolates E. faecalis (n = 51) from the urine of children aged 3 days to 17 years who were treated for urinary tract infection between 2013 and 2017. The biological properties of enterococci were evaluated by means of classical microbiological and up-to-date molecular genetic methods. Statistical processing of digital data was carried out using non-parametric methods.Results. Phenotypic and genetic heterogeneity of microbiological properties of the studied urinary enterococci isolates was revealed. Using statistical methods of analysis, the authors established significant correlations between pathogenicity genes, antibiotic resistance and phenotypic manifestations of biological properties in urinary isolates E. faecalis. The results of evaluating the phenotypic manifestations of biological properties and the presence of certain genes enabled the enterococci to be classified into groups that correlated with certain sequence types (ST). Based on the revealed relationships of some biological properties of urinary isolates E. faecalis with certain sequence types, the authors developed an algorithm for assessing etiologically significant and highly virulent E. faecalis isolated from the urine of children with UTI.Conclusions. A comprehensive determination of some, potentially relevant biological properties, of the pathogen – enzymatic activity associated with pathogenicity and biochemical activities, antibiotic resistance (not only at the phenotypic, but also at the genetic level) – allows for assessing the diagnostic value of urostams E. faecalis, isolated from the urine of children with UTI, which will contribute to a personalized approach to treatment of these patients.
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评价尿路感染患儿粪肠球菌分离的病原学意义
的目标。对泌尿系统感染(UTI)患儿尿液中分离的粪肠球菌的微生物学特性进行综合评价,确定其病原学意义。材料和方法。该研究从2013年至2017年接受尿路感染治疗的3天至17岁儿童尿液中分离出粪肠球菌(n = 51)。采用经典的微生物学和最新的分子遗传学方法对肠球菌的生物学特性进行了评价。采用非参数方法对数字数据进行统计处理。揭示了所研究的尿肠球菌分离株的微生物特性的表型和遗传异质性。采用统计学分析方法,建立了尿分离株的致病性基因、抗生素耐药性与生物学特性表型表现之间的显著相关性。评估生物学特性的表型表现和某些基因的存在的结果使肠球菌被分类为与某些序列类型(ST)相关的组。基于尿分离的粪肠球菌的某些生物学特性与特定序列类型之间的关系,作者开发了一种评估从尿路感染儿童尿液中分离的具有病原学意义和高毒力的粪肠球菌的算法。全面确定病原体的一些潜在相关生物学特性-与致病性和生化活性相关的酶活性,抗生素耐药性(不仅在表型上,而且在遗传水平上)-允许评估从尿路感染儿童尿液中分离的粪尿球菌的诊断价值,这将有助于对这些患者的个性化治疗方法。
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