D. Lacitignola, Massimo Frittelli, V. Cusimano, A. De Gaetano
{"title":"Pattern formation on a growing oblate spheroid. an application to adult sea urchin development","authors":"D. Lacitignola, Massimo Frittelli, V. Cusimano, A. De Gaetano","doi":"10.3934/jcd.2021027","DOIUrl":null,"url":null,"abstract":"In this study, the formation of the adult sea urchin shape is rationalized within the Turing's theory paradigm. The emergence of protrusions from the expanding underlying surface is described through a reaction-diffusion model with Gray-Scott kinetics on a growing oblate spheroid. The case of slow exponential isotropic growth is considered. The model is first studied in terms of the spatially homogenous equilibria and of the bifurcations involved. Turing diffusion-driven instability is shown to occur and the impact of the slow exponential growth on the resulting Turing regions adequately discussed. Numerical investigations validate the theoretical results showing that the combination between an inhibitor and an activator can result in a distribution of spot concentrations that underlies the development of ambulacral tentacles in the sea urchin's adult stage. Our findings pave the way for a model-driven experimentation that could improve the current biological understanding of the gene control networks involved in patterning.","PeriodicalId":37526,"journal":{"name":"Journal of Computational Dynamics","volume":"87 1","pages":""},"PeriodicalIF":1.0000,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Computational Dynamics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3934/jcd.2021027","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Engineering","Score":null,"Total":0}
引用次数: 2
Abstract
In this study, the formation of the adult sea urchin shape is rationalized within the Turing's theory paradigm. The emergence of protrusions from the expanding underlying surface is described through a reaction-diffusion model with Gray-Scott kinetics on a growing oblate spheroid. The case of slow exponential isotropic growth is considered. The model is first studied in terms of the spatially homogenous equilibria and of the bifurcations involved. Turing diffusion-driven instability is shown to occur and the impact of the slow exponential growth on the resulting Turing regions adequately discussed. Numerical investigations validate the theoretical results showing that the combination between an inhibitor and an activator can result in a distribution of spot concentrations that underlies the development of ambulacral tentacles in the sea urchin's adult stage. Our findings pave the way for a model-driven experimentation that could improve the current biological understanding of the gene control networks involved in patterning.
期刊介绍:
JCD is focused on the intersection of computation with deterministic and stochastic dynamics. The mission of the journal is to publish papers that explore new computational methods for analyzing dynamic problems or use novel dynamical methods to improve computation. The subject matter of JCD includes both fundamental mathematical contributions and applications to problems from science and engineering. A non-exhaustive list of topics includes * Computation of phase-space structures and bifurcations * Multi-time-scale methods * Structure-preserving integration * Nonlinear and stochastic model reduction * Set-valued numerical techniques * Network and distributed dynamics JCD includes both original research and survey papers that give a detailed and illuminating treatment of an important area of current interest. The editorial board of JCD consists of world-leading researchers from mathematics, engineering, and science, all of whom are experts in both computational methods and the theory of dynamical systems.