Evaluation of genetic diversity of Himalayan balsam (Impatiens glandulifera Royle) populations using microsatellites

IF 0.8 4区 农林科学 Q3 AGRICULTURE, MULTIDISCIPLINARY Zemdirbyste-agriculture Pub Date : 2022-09-27 DOI:10.13080/z-a.2022.109.033
L. Jocienė, E. Krokaitė, T. Rekašius, A. Paulauskas, E. Kupčinskienė
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引用次数: 1

Abstract

Himalayan balsam ( Impatiens glandulifera Royle) belongs to invasive alien species of European Union concern. Acquisition of the new molecular data from a geographical point of view might be valuable getting ideas about the nowadays invasion steps of I. glandulifera to more northern and eastern parts of the Europe, the source population(s) in the local scale as well as for elucidation of the patterns of the spread of alien species in Lithuania. In the period of 2010–2019, 95 sites of I. glandulifera were recorded in Lithuania. The present study was aimed at evaluation of genetic diversity at microsatellite loci of Lithuanian populations of I. glandulifera . For molecular analysis employing 9 microsatellite (simple sequence repeats, SSR) markers, a total of 20 Lithuanian populations of I. glandulifera (15 individuals in each) were used. Allelic richness ( A R ) ranged from 1.1 to 1.39 per population, and the expected heterozygosity ( H E ) ranged from 0.10 to 0.39 per one. No significant correlation (according to Mantel test) between the geographic distances and genetic differentiation was determined between the Lithuanian populations of I. glandulifera . AMOVA showed that variability within the populations (56.2%) was higher than that among the populations (43.7%). According to the principal coordinate analysis (PCoA), three principal axes explained 60% of the total genetic variation of populations. Significant results were obtained when the populations were grouped according to the five geographical areas of Lithuania: variation among the groups comprised 5.73% of the total variation. Bayesian clustering analysis indicated the highest ΔK values at K = 12, and the next highest value was K = 3. It may indicate the multiple introductions of I. glandulifera to Lithuania.
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喜马拉雅凤仙花(Impatiens glandulifera Royle)居群遗传多样性的微卫星评价
喜马拉雅凤仙花(Impatiens glandulifera Royle)属于欧盟关注的外来入侵物种。从地理学的角度获得新的分子数据可能有助于了解腺芽瓢虫在欧洲北部和东部的入侵步骤,在当地尺度上的源种群,以及阐明外来物种在立陶宛的传播模式。2010年至2019年,立陶宛共记录了95处腺纹夜蛾地点。本研究旨在评价立陶宛居群的微卫星位点遗传多样性。利用9个微卫星(SSR)标记对20个立陶宛居群(每个居群15个个体)进行分子分析。等位基因丰富度(A R)为1.1 ~ 1.39 /个群体,期望杂合度(H E)为0.10 ~ 0.39 /个群体。根据Mantel检验,立陶宛居群间的地理距离与遗传分化无显著相关。AMOVA分析表明,种群内变异率(56.2%)高于种群间变异率(43.7%)。根据主坐标分析(PCoA),三个主轴解释了种群总遗传变异的60%。根据立陶宛的五个地理区域对种群进行分组,得到了显著的结果:组间变异占总变异的5.73%。贝叶斯聚类分析表明,ΔK值在K = 12时最高,K = 3时次之。这可能表明立陶宛曾多次引种腺蕨(I. glandulifera)。
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来源期刊
Zemdirbyste-agriculture
Zemdirbyste-agriculture AGRICULTURE, MULTIDISCIPLINARY-
CiteScore
1.80
自引率
11.10%
发文量
36
审稿时长
>12 weeks
期刊介绍: Zemdirbyste-Agriculture is a quarterly scientific journal which covers a wide range of topics in the field of agricultural sciences, agronomy. It publishes articles of original research findings in the English language in the field of agronomy (soil and crop management, crop production, plant protection, plant breeding and genetics, biotechnology, plant nutrition, agrochemistry, soil science, microbiology etc.) and related areas. Articles are peer-reviewed. Review, debating papers as well as those of a methodological nature will also be considered.
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