Designing of Anticancer Therapeutical Strategies: Implications of Molecular Docking Studies of Phytochemicals of Cichorium Intybus to Metabolic Regulatory Enzymes

Abhishek Pathak, S. P. Singh, A. Prakash, A. Tiwari
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Abstract

Altered metabolism is a significant characteristic of cancer, with malignant cells exhibiting elevated levels of enzymes involved in bioenergetic and biosynthetic processes. Targeting metabolic enzymes has become a key approach in anticancer therapy, leading to the discovery of metabolic inhibitors such as 3-bromopyruvate (3-BP) with broad anticancer activity. Novel therapeutics are needed to treat and prevent this fatal disease, and natural substances are gaining attention as potentially safer alternatives to conventional therapies like chemotherapy. This study aimed to identify novel drug-like molecules for anticancer treatment using an in-silico approach. Twenty-eight phytocompounds from Cichorium intybus were selected for molecular docking against target enzymes involved in the TCA and glycolysis cycles and compared with 3-BP, a standard broad-spectrum anticancer drug, using Maestro (Schrodinger software). Comparison of docking scores revealed that the phytoconstituents of Cichorium intybus exhibited stronger binding to metabolic enzymes compared to 3-BP. Additionally, drug-likeness analysis using the admetSAR and Lipinski filter indicated that most of the selected phytoconstituents and 3-BP demonstrated desirable criteria as anticancer drugs. Conclusion This research offers insightful information about molecular interactions between phytoconstituents of Cichorium intybus, 3-BP, and metabolic enzymes. These findings may contribute to the development and optimization of therapeutic approaches against cancer, utilizing these phytoconstituents as ligands.
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抗癌治疗策略的设计:菊苣植物化学物质与代谢调节酶分子对接研究的意义
代谢改变是癌症的一个重要特征,恶性细胞表现出参与生物能量和生物合成过程的酶水平升高。靶向代谢酶已成为抗癌治疗的关键途径,导致发现代谢抑制剂,如3-溴丙酮酸(3-BP)具有广泛的抗癌活性。需要新的治疗方法来治疗和预防这种致命的疾病,天然物质作为可能比化疗等传统疗法更安全的替代品而受到关注。这项研究的目的是利用计算机方法识别用于抗癌治疗的新型药物样分子。利用Maestro (Schrodinger software)软件,选取28个菊科植物化合物与TCA和糖酵解循环中的靶酶进行分子对接,并与标准广谱抗癌药物3-BP进行比较。对接分数的比较表明,与3-BP相比,菊苣的植物成分与代谢酶的结合更强。此外,使用admetSAR和Lipinski过滤器进行药物相似性分析表明,大多数选定的植物成分和3-BP都符合理想的抗癌药物标准。结论本研究为菊苣植物成分、3-BP和代谢酶之间的分子相互作用提供了新的思路。这些发现可能有助于开发和优化利用这些植物成分作为配体的抗癌治疗方法。
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