Anti-tumor mechanism of Camellia nitidissima based on network pharmacology and molecular docking

Wang Jun, Jing-jing Cheng
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Abstract

Modern pharmacological research indicated that Camellia nitidissima (CAM) had significant anti-tumor activity, but the investigation of its mechanism was still lacking. The multi-component, multi-target and multi-pathway mechanism of CAM against tumor was investigated based on network pharmacology and molecular docking. The active ingredients and targets of CAM were selected through a literature search, Traditional Chinese Medicine Systems Pharmacology database and PharmMapper database, and tumor-related targets were selected by GeneCards database, then to obtain the anti-tumor related targets of CAM. The protein interaction relationship was obtained through STRING database, protein-protein interaction network was constructed using Cytoscape 3.7.2 software, and enrichment analysis of GO and KEGG was conducted. AutoDock Tools 1.5.6 software was used to verify the molecular docking between the key ingredients and the key targets. Catechin, epicatechin and luteolin were identified as the key anti-tumor related ingredients, and ESR1, EGFR, MAPK8, MAPK10, AR, PGR, F2 and PIK3CG were identified as the key targets. The GO entries mainly involved metabolic process, cellular process, response to stimulus, organelle, cytosol, etc. The KEGG enrichment showed that the key pathways included pathways in cancer, prostate cancer, pancreatic cancer, breast cancer, estrogen signaling pathway, MAPK signaling pathway, PI3K-Akt signaling pathway, etc. KEGG pathway maps indicated that the anti-tumor effect of CAM may be mainly achieved by intervening related targets in the following pathways: AR-HSP/AR-AR/PSA/proliferation and evading apoptosis; F2/GPCR/…/ROCK/tissue invasion and metastasis; F2/GPCR/…/Raf/MAPK signaling pathway/proliferation and sustained angiogenesis; EGFR/PI3K-Akt signaling pathway/proliferation, evading apoptosis and sustained angiogenesis; EGFR/Grb2/…/Raf/MAPK signaling pathway/proliferation and sustained angiogenesis; ER/Estrogen signaling pathway/proliferation; PR/PR-COR/Wnts-RANKL/proliferation; oxidative stress (.O₂-, .OH, H₂O₂)/KEAP1/NRF2/.../proliferation and evading apoptosis. The results of molecular docking showed that the key active ingredients had a good binding activity with each key target. It was predicted that the main active ingredients of CAM could bind to tumor-related targets, such as receptor and coagulation-promoting factor, scavenge free radicals, and then interfere with the occurrence and development of tumors.
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基于网络药理学和分子对接的山茶抗肿瘤机制研究
现代药理学研究表明,山茶具有显著的抗肿瘤活性,但对其作用机制的研究尚缺乏。基于网络药理学和分子对接,研究CAM多组分、多靶点、多通路的抗肿瘤机制。通过文献检索、中药系统药理学数据库和PharmMapper数据库筛选CAM的有效成分和靶点,通过GeneCards数据库筛选肿瘤相关靶点,得到CAM的抗肿瘤相关靶点。通过STRING数据库获取蛋白相互作用关系,利用Cytoscape 3.7.2软件构建蛋白-蛋白相互作用网络,并对GO和KEGG进行富集分析。使用AutoDock Tools 1.5.6软件验证关键成分与关键靶点之间的分子对接。儿茶素、表儿茶素和木草素是抗肿瘤相关的关键成分,ESR1、EGFR、MAPK8、MAPK10、AR、PGR、F2和PIK3CG是关键靶点。氧化石墨烯的进入主要涉及代谢过程、细胞过程、对刺激的反应、细胞器、细胞质等。KEGG富集表明,关键通路包括癌症、前列腺癌、胰腺癌、乳腺癌、雌激素信号通路、MAPK信号通路、PI3K-Akt信号通路等。KEGG通路图显示CAM的抗肿瘤作用可能主要通过干预AR-HSP/AR-AR/PSA/增殖及规避凋亡通路的相关靶点来实现;F2/GPCR/…/ROCK/组织侵袭转移;F2/GPCR/…/Raf/MAPK信号通路/增殖和持续血管生成;EGFR/PI3K-Akt信号通路/增殖,逃避细胞凋亡和持续血管生成;EGFR/Grb2/…/Raf/MAPK信号通路/增殖与持续血管生成;ER/雌激素信号通路/增殖;公关/ PR-COR Wnts-RANKL /扩散;氧化应激O₂-,哦,h₂O₂)/ keap1 / nrf2 /…/增殖和逃避细胞凋亡。分子对接结果表明,关键活性成分与各关键靶点具有良好的结合活性。预测CAM的主要活性成分可与肿瘤相关靶点结合,如受体、促凝因子等,清除自由基,进而干扰肿瘤的发生发展。
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