肽核酸

IF 3.2 4区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biopolymers Pub Date : 2022-12-05 DOI:10.1002/bip.23523
Bruce A. Armitage
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My Ph.D. thesis research had nothing to do with nucleic acid chemistry, but I still found the article fascinating, as the authors—Peter Nielsen, Michael Egholm, Rolf Berg, and the late Ole Buchardt at the University of Copenhagen (Denmark)—reported the ability of PNA to bind complementary DNA targets via a novel strand-invasion mechanism. The exceptionally high affinity of PNA for its targets, its resistance to natural degradation pathways and its fidelity to the Watson–Crick rules for base pairing sparked an intense level of excitement in both the fundamental science and the applications of PNA that continues to this day. Reading that paper certainly triggered my interest in nucleic acids and motivated me to seek out a postdoctoral position in the field. 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引用次数: 0

摘要

我记得就像昨天一样,尽管那是30多年前的事了。我是亚利桑那大学(美国)的一名研究生,坐在办公桌前,吃着午餐,阅读最新一期的《科学》杂志。我偶然看到一篇关于一种有趣的新分子的文章,叫做“聚酰胺核酸”或PNA。[1](我们现在将PNA定义为“肽核酸”,这是一个完美的名字,除了PNA在技术上不是肽,它不在细胞核中发现,它不是酸!)我的博士论文研究与核酸化学无关,但我仍然觉得这篇文章很吸引人,因为它的作者——丹麦哥本哈根大学的peter Nielsen、Michael Egholm、Rolf Berg和Ole Buchardt——报道了PNA通过一种新的链入侵机制结合互补DNA靶点的能力。PNA对其靶标的高亲和力,对自然降解途径的抵抗力以及对碱基配对的沃森-克里克规则的忠诚,在基础科学和PNA的应用中引发了强烈的兴奋,并持续到今天。读了这篇论文,我对核酸产生了浓厚的兴趣,并决定在这一领域寻求博士后职位。两年后,我加入了美国伊利诺伊大学Gary Schuster的实验室,在那里,由于一个幸运的意外,我有幸通过与Peter Nielsen的实验室合作,开始与PNA一起工作。29年后,我的实验室继续研究这种神奇的分子及其后代。那篇论文改变了我的生活!在这个生物聚合物的特别收集中,我们收集了原始研究和综述文章,这些文章强调了pna的结构和应用的持续发展。增强亲和性的主链修饰、促进细胞摄取的核碱基修饰、在生物传感和自组装中的新应用,以及针对非规范结构(如双链RNA)的进展,都证明了PNA的多功能性。尽管由于聚合等技术问题,PNA的原始结构一直困扰着研究人员,但下一代PNA已经克服了这些挑战。此外,通过将氨基酸侧链整合到主链中,利用PNA的肽样特征,将PNA与核酸字母表汤中的其他成员(例如与天然生物聚合物DNA和RNA更密切相关的LNA)区分开来。我们希望您喜欢阅读这些文章,并希望您会不时地回来,因为我们计划利用虚拟特别收藏的动态特性,在未来增加更多的贡献。谁知道PNA还会有什么,但化学家们正在生产的似乎无穷无尽的品种,以及科学家和生物技术专家继续开发的创新应用,都让人非常乐观地认为,PNA宇宙将从1991年那篇论文的大爆炸开始继续膨胀。
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Peptide nucleic acid

I remember it like it was yesterday, even though it was more than 30 years ago. I was a graduate student at the University of Arizona (U.S.A.), sitting at my desk, eating lunch and perusing the latest issue of Science magazine. I came across an article about an intriguing new molecule called “polyamide nucleic acid” or PNA.[1] (We now define PNA as “peptide nucleic acid,” which is a perfectly fine name, except that PNA technically is not a peptide, it is not found in the nucleus and it is not an acid!) My Ph.D. thesis research had nothing to do with nucleic acid chemistry, but I still found the article fascinating, as the authors—Peter Nielsen, Michael Egholm, Rolf Berg, and the late Ole Buchardt at the University of Copenhagen (Denmark)—reported the ability of PNA to bind complementary DNA targets via a novel strand-invasion mechanism. The exceptionally high affinity of PNA for its targets, its resistance to natural degradation pathways and its fidelity to the Watson–Crick rules for base pairing sparked an intense level of excitement in both the fundamental science and the applications of PNA that continues to this day. Reading that paper certainly triggered my interest in nucleic acids and motivated me to seek out a postdoctoral position in the field. Two years later, I joined the laboratory of Gary Schuster at the University of Illinois (U.S.A.) where, by way of a happy accident, I had the good fortune to begin working with PNA through collaboration with Peter Nielsen's laboratory. 29 years later, my lab continues to work with this amazing molecule and its descendants. That paper changed my life!

In this Special Collection of Biopolymers, we have gathered original research and review articles that highlight the ongoing evolution of PNA—both its structure and its applications. Backbone modifications that enhance affinity, nucleobase modifications that promote cell uptake, new applications in biosensing and self-assembly, and advances in targeting non-canonical structures, such as double-stranded RNA all demonstrate the versatility of PNA. While the original structure of PNA bedeviled researchers because of technical issues, for example aggregation, the next generation of PNAs have overcome these challenges. Moreover, the exploitation of PNA's peptide-like character via incorporation of amino acid side chains into the backbone, distinguishes PNA from other members of the nucleic acid alphabet soup, for example, LNA, that are more closely related to the natural biopolymers DNA and RNA.

We hope you enjoy reading these articles and that you will return from time to time as we plan to take advantage of the dynamic nature of a virtual Special Collection to add more contributions in the future. Who knows what is in store for PNA, but the seemingly endless varieties that chemists are producing and the innovative new applications that scientists and biotechnologists continue to develop give great optimism that the PNA universe will continue to expand from the Big Bang of the 1991 paper.

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来源期刊
Biopolymers
Biopolymers 生物-生化与分子生物学
CiteScore
5.30
自引率
0.00%
发文量
48
审稿时长
3 months
期刊介绍: Founded in 1963, Biopolymers publishes strictly peer-reviewed papers examining naturally occurring and synthetic biological macromolecules. By including experimental and theoretical studies on the fundamental behaviour as well as applications of biopolymers, the journal serves the interdisciplinary biochemical, biophysical, biomaterials and biomedical research communities.
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