揭开热带洞穴中真菌的神秘面纱:丰富的真菌以及对一个新属和六个新种的描述。

Fungal systematics and evolution Pub Date : 2022-12-01 Epub Date: 2022-11-01 DOI:10.3114/fuse.2022.10.06
V C S Alves, R A Lira, J M S Lima, R N Barbosa, D M Bento, E Barbier, E Bernard, C M Souza-Motta, J D P Bezerra
{"title":"揭开热带洞穴中真菌的神秘面纱:丰富的真菌以及对一个新属和六个新种的描述。","authors":"V C S Alves, R A Lira, J M S Lima, R N Barbosa, D M Bento, E Barbier, E Bernard, C M Souza-Motta, J D P Bezerra","doi":"10.3114/fuse.2022.10.06","DOIUrl":null,"url":null,"abstract":"<p><p>Caves are special environments that harbour an incredible diversity of life, including fungal species. Brazilian caves have been demonstrated to be biodiversity hotspots for known and unknown fungal species. We investigated the richness of culturable fungi in a tropical cave in Brazil by isolating these microorganisms from the sediment and air. The fungal abundance of colony-forming units (CFUs) was 3 178 in sediment and 526 in air. We used morphological features and phylogenetic analyses of actin (<i>actA</i>), calmodulin (<i>cmdA</i>), internal transcribed spacer regions and intervening 5.8S rRNA (ITS), large subunit (LSU) rDNA, RNA polymerase II second largest subunit (<i>rpb2</i>), translation elongation factor 1-alpha (<i>tef1</i>), and β-tubulin (<i>tub2</i>) genes to identify these isolates. Forty-one species belonging to 17 genera of <i>Ascomycota</i> and two of <i>Basidiomycota</i> were identified, and the genus <i>Aspergillus</i> was most commonly observed in the cave (13 taxa). Twenty-four species were found in sediment (16 exclusives) and 25 species were found in air (17 exclusives). In this study, we introduced a new genus (<i>Pseudolecanicillium gen. nov</i>.) in the family <i>Cordycipitaceae</i> and six new species (14 % of the total taxa identified) of fungal isolates obtained from sediment and air: <i>Aspergillus lebretii sp. nov</i>., <i>Malbranchea cavernosa sp. nov</i>., <i>Pseudohumicola cecavii sp. nov</i>., <i>Pseudolecanicillium caatingaense sp. nov</i>., <i>Talaromyces cavernicola sp. nov</i>., and <i>Tritirachium brasiliense</i> <i>sp. nov</i>. In addition, we built a checklist of the fungal taxa reported from Brazilian caves. Our results highlight the contribution of Brazilian caves to the estimation of national and global fungal diversity. <b>Citation:</b> Alves VCS, Lira RA, Lima JMS, Barbosa RN, Bento DM, Barbier E, Bernard E, Souza-Motta CM, Bezerra JDP (2022). Unravelling the fungal darkness in a tropical cave: richness and the description of one new genus and six new species. <i>Fungal Systematics and Evolution</i> <b>10</b>: 139-167. doi: 10.3114/fuse.2022.10.06.</p>","PeriodicalId":73121,"journal":{"name":"Fungal systematics and evolution","volume":"10 ","pages":"139-167"},"PeriodicalIF":0.0000,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9875697/pdf/","citationCount":"0","resultStr":"{\"title\":\"Unravelling the fungal darkness in a tropical cave: richness and the description of one new genus and six new species.\",\"authors\":\"V C S Alves, R A Lira, J M S Lima, R N Barbosa, D M Bento, E Barbier, E Bernard, C M Souza-Motta, J D P Bezerra\",\"doi\":\"10.3114/fuse.2022.10.06\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Caves are special environments that harbour an incredible diversity of life, including fungal species. Brazilian caves have been demonstrated to be biodiversity hotspots for known and unknown fungal species. We investigated the richness of culturable fungi in a tropical cave in Brazil by isolating these microorganisms from the sediment and air. The fungal abundance of colony-forming units (CFUs) was 3 178 in sediment and 526 in air. We used morphological features and phylogenetic analyses of actin (<i>actA</i>), calmodulin (<i>cmdA</i>), internal transcribed spacer regions and intervening 5.8S rRNA (ITS), large subunit (LSU) rDNA, RNA polymerase II second largest subunit (<i>rpb2</i>), translation elongation factor 1-alpha (<i>tef1</i>), and β-tubulin (<i>tub2</i>) genes to identify these isolates. Forty-one species belonging to 17 genera of <i>Ascomycota</i> and two of <i>Basidiomycota</i> were identified, and the genus <i>Aspergillus</i> was most commonly observed in the cave (13 taxa). Twenty-four species were found in sediment (16 exclusives) and 25 species were found in air (17 exclusives). In this study, we introduced a new genus (<i>Pseudolecanicillium gen. nov</i>.) in the family <i>Cordycipitaceae</i> and six new species (14 % of the total taxa identified) of fungal isolates obtained from sediment and air: <i>Aspergillus lebretii sp. nov</i>., <i>Malbranchea cavernosa sp. nov</i>., <i>Pseudohumicola cecavii sp. nov</i>., <i>Pseudolecanicillium caatingaense sp. nov</i>., <i>Talaromyces cavernicola sp. nov</i>., and <i>Tritirachium brasiliense</i> <i>sp. nov</i>. In addition, we built a checklist of the fungal taxa reported from Brazilian caves. Our results highlight the contribution of Brazilian caves to the estimation of national and global fungal diversity. <b>Citation:</b> Alves VCS, Lira RA, Lima JMS, Barbosa RN, Bento DM, Barbier E, Bernard E, Souza-Motta CM, Bezerra JDP (2022). Unravelling the fungal darkness in a tropical cave: richness and the description of one new genus and six new species. <i>Fungal Systematics and Evolution</i> <b>10</b>: 139-167. doi: 10.3114/fuse.2022.10.06.</p>\",\"PeriodicalId\":73121,\"journal\":{\"name\":\"Fungal systematics and evolution\",\"volume\":\"10 \",\"pages\":\"139-167\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9875697/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Fungal systematics and evolution\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3114/fuse.2022.10.06\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2022/11/1 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fungal systematics and evolution","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3114/fuse.2022.10.06","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/11/1 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

洞穴是一种特殊的环境,蕴藏着令人难以置信的生命多样性,包括真菌物种。巴西洞穴已被证明是已知和未知真菌物种的生物多样性热点。我们从沉积物和空气中分离出这些微生物,调查了巴西一个热带洞穴中可培养真菌的丰富程度。沉积物中的真菌菌落形成单位(CFU)数量为 3 178 个,空气中为 526 个。我们利用形态特征和肌动蛋白(actA)、钙调蛋白(cmdA)、内部转录间隔区和中间的 5.8S rRNA(ITS)、大亚基(LSU)rDNA、RNA 聚合酶 II 第二大亚基(rpb2)、翻译延伸因子 1-α(tef1)和 β-微管蛋白(tub2)基因的系统发育分析来鉴定这些分离物。共鉴定出 41 个物种,隶属于子囊菌界的 17 个属和基生菌界的 2 个属,其中曲霉属在洞穴中最常见(13 个类群)。在沉积物中发现了 24 个菌种(16 个独家),在空气中发现了 25 个菌种(17 个独家)。在这项研究中,我们从沉积物和空气中获得的真菌分离物中引入了虫草科的一个新属(Pseudolecanicillium gen.nov.)和六个新种(占已鉴定类群总数的 14%):此外,我们还建立了一份巴西洞穴真菌分类群清单。我们的研究结果凸显了巴西洞穴对国家和全球真菌多样性的贡献。引用:Alves VCS, Lira RA, Lima JMS, Barbosa RN, Bento DM, Barbier E, Bernard E, Souza-Motta CM, Bezerra JDP (2022)。揭开热带洞穴中真菌的神秘面纱:丰富的真菌以及一个新属和六个新种的描述。Fungal Systematics and Evolution 10: 139-167. doi: 10.3114/fuse.2022.10.06.
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Unravelling the fungal darkness in a tropical cave: richness and the description of one new genus and six new species.

Caves are special environments that harbour an incredible diversity of life, including fungal species. Brazilian caves have been demonstrated to be biodiversity hotspots for known and unknown fungal species. We investigated the richness of culturable fungi in a tropical cave in Brazil by isolating these microorganisms from the sediment and air. The fungal abundance of colony-forming units (CFUs) was 3 178 in sediment and 526 in air. We used morphological features and phylogenetic analyses of actin (actA), calmodulin (cmdA), internal transcribed spacer regions and intervening 5.8S rRNA (ITS), large subunit (LSU) rDNA, RNA polymerase II second largest subunit (rpb2), translation elongation factor 1-alpha (tef1), and β-tubulin (tub2) genes to identify these isolates. Forty-one species belonging to 17 genera of Ascomycota and two of Basidiomycota were identified, and the genus Aspergillus was most commonly observed in the cave (13 taxa). Twenty-four species were found in sediment (16 exclusives) and 25 species were found in air (17 exclusives). In this study, we introduced a new genus (Pseudolecanicillium gen. nov.) in the family Cordycipitaceae and six new species (14 % of the total taxa identified) of fungal isolates obtained from sediment and air: Aspergillus lebretii sp. nov., Malbranchea cavernosa sp. nov., Pseudohumicola cecavii sp. nov., Pseudolecanicillium caatingaense sp. nov., Talaromyces cavernicola sp. nov., and Tritirachium brasiliense sp. nov. In addition, we built a checklist of the fungal taxa reported from Brazilian caves. Our results highlight the contribution of Brazilian caves to the estimation of national and global fungal diversity. Citation: Alves VCS, Lira RA, Lima JMS, Barbosa RN, Bento DM, Barbier E, Bernard E, Souza-Motta CM, Bezerra JDP (2022). Unravelling the fungal darkness in a tropical cave: richness and the description of one new genus and six new species. Fungal Systematics and Evolution 10: 139-167. doi: 10.3114/fuse.2022.10.06.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
7.30
自引率
0.00%
发文量
0
期刊最新文献
Botryosphaeriaceae partially overlap on asymptomatic and symptomatic tissues of Anacardiaceae in agroecosystems and conservation areas in northern South Africa. Cylindrocladiella species from Cunninghamia lanceolata plantation soils in southwestern China. Mjuua agapanthi gen. et sp. nov., a biotrophic mycoparasite of Fusarium spp. A diverse range of Phytophthora species from botanical gardens in South Africa, including the novel Clade 5 species, Phytophthora mammiformis sp. nov. Response to the detection of Rugonectria castaneicola and Rugonectria wingfieldii sp. nov. on Quercus in Australia.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1