使用MPI文件缓存和I/O签名的并行I/O预取

S. Byna, Yong Chen, Xian-He Sun, R. Thakur, W. Gropp
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引用次数: 144

摘要

并行I/O预取被认为是提高I/O性能的有效方法。但是,其有效性取决于能否快速确定未来I/O访问之间的模式并及时获取数据,这在一般情况下很难实现。在本研究中,我们提出了一种基于I/O签名的预取策略。其思想是使用应用程序的预定I/O签名来指导预取。为了实现这个想法,我们首先推导了模式的分类,并引入了一个简单而有效的签名符号来表示模式。然后,我们开发了一个工具包来自动跟踪和生成I/O签名。最后,我们为MPI-IO库设计并实现了一个基于线程的客户端集合预取缓存层来支持预取。预取线程读取应用程序的I/O签名,并通过在运行时观察I/O访问来调整它们。实验结果表明,该预取方法可显著提高具有复杂模式的应用程序的I/O性能。
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Parallel I/O prefetching using MPI file caching and I/O signatures
Parallel I/O prefetching is considered to be effective in improving I/O performance. However, the effectiveness depends on determining patterns among future I/O accesses swiftly and fetching data in time, which is difficult to achieve in general. In this study, we propose an I/O signature-based prefetching strategy. The idea is to use a predetermined I/O signature of an application to guide prefetching. To put this idea to work, we first derived a classification of patterns and introduced a simple and effective signature notation to represent patterns. We then developed a toolkit to trace and generate I/O signatures automatically. Finally, we designed and implemented a thread-based client-side collective prefetching cache layer for MPI-IO library to support prefetching. A prefetching thread reads I/O signatures of an application and adjusts them by observing I/O accesses at runtime. Experimental results show that the proposed prefetching method improves I/O performance significantly for applications with complex patterns.
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