基于基因转座子的克隆选择聚类算法

Ruochen Liu, Zhengchun Sheng, L. Jiao
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引用次数: 12

摘要

受Barbara McClintock提出的基因转座子原理的启发,本文提出了一种新的多类数据聚类的免疫计算算法——基于基因转座子的克隆选择算法(GTCSA),该算法不需要预先知道聚类的个数;一种改进的克隆选择算法被用于确定聚类的数量以及改进聚类中心。在克隆选择算法框架中引入抗体转座子算子,实现自动寻找最优簇数。该方法与基于变字符串长度遗传算法(VGA)的聚类技术在多个真实数据集和合成数据集的测试集上进行了广泛的比较。实验结果表明,在多类数据集聚类时,GTCSA在稳定性和收敛速度上优于VGA。
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Gene transposon based clonal selection algorithm for clustering
Inspired by the principle of gene transposon proposed by Barbara McClintock, a new immune computing algorithm for clustering multi-class data sets named as Gene Transposition based Clone Selection Algorithm (GTCSA) is proposed in this paper, The proposed algorithm does not require a prior knowledge of the numbers of clustering; an improved variant of the clonal selection algorithm has been used to determine the number of clusters as well as to refine the cluster center. a novel operator called antibody transposon is introduced to the framework of clonal selection algorithm which can realize to find the optimal number of cluster automatically. The proposed method has been extensively compared with Variable-string-length Genetic Algorithm(VGA)based clustering techniques over a test suit of several real life data sets and synthetic data sets. The results of experiments indicate the superiority of the GTCSA over VGA on stability and convergence rate, when clustering multi-class data sets.
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