{"title":"对日本传统论文和论文DNA存在和质量评价的多元统计分析","authors":"Minsoo Shin, Toshiharu Enomae","doi":"10.1186/s40494-023-01065-5","DOIUrl":null,"url":null,"abstract":"Abstract Traditional papermaking was a significant innovation that intrigued the information-sharing society in a wide range of the globe. The importance of finding the historical background hidden behind the historical traditional paper is critical to understanding societies in history. Advanced molecular biological research is applied to many forensic studies to identify the origin and criminal events. Yet, biological research refrained from the heritage science of traditional papers due to its damage to the samples. The current study explores the Pearson correlation between DNA in traditional paper and non-destructive measurement of characteristics of traditional paper. DNA concentration and purity were found to have a proportional relationship based on the CIEL * a * b * color system. The color of the traditional paper was assessed assessment shows green and yellow rather than red and blue. The DNA concentration demonstrated a positive linear correlation with the peaks of 992 cm −1 , 1599 cm −1 , and 1628 to 1638 cm −1 region, which were lignin-specific functional groups. The presence of lignin in traditional paper defines the colors green and yellow, which is related to the presence of a cell wall. The quantity of cell walls present is linked to DNA survival during the traditional papermaking process. Furthermore, the partial least square (PLS) regression model is established. The prediction model based on DNA, paper properties, and smoothing + the second derivative preprocessed attenuated total reflection-Fourier-transform infrared (ATR-FTIR) spectral data demonstrated valid purity predictions. The evaluation parameter of the cross-validated prediction model contains a low Root Mean Square Error of Cross-Validation (RMSECV) of 0.091 for DNA purity. The determination coefficient was close to 1. However, the further establishment of a validated DNA extraction methodology is required for the consistency of the prediction model for DNA concentration. The hierarchical clustering analysis demonstrated the agglomerative dendrogram on traditional paper samples. For the dendrogram, the Nasu paper mulberry (originating in northern Japan) was distinguished from another paper mulberry (originating in southwestern Japan) by clustering. By multivariate statistical analysis, the DNA presence and quality were predictable from the Japanese traditional papers. In addition, the clustering analysis provided the possible origin of paper mulberry materials for traditional papers. Based on the preliminary information, the need for DNA analysis on historical traditional paper can be determined.","PeriodicalId":13109,"journal":{"name":"Heritage Science","volume":"176 2","pages":"0"},"PeriodicalIF":2.6000,"publicationDate":"2023-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Multivariate statistical analysis on Japanese traditional papers, washi, for evaluation of DNA presence and quality\",\"authors\":\"Minsoo Shin, Toshiharu Enomae\",\"doi\":\"10.1186/s40494-023-01065-5\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract Traditional papermaking was a significant innovation that intrigued the information-sharing society in a wide range of the globe. The importance of finding the historical background hidden behind the historical traditional paper is critical to understanding societies in history. Advanced molecular biological research is applied to many forensic studies to identify the origin and criminal events. Yet, biological research refrained from the heritage science of traditional papers due to its damage to the samples. The current study explores the Pearson correlation between DNA in traditional paper and non-destructive measurement of characteristics of traditional paper. DNA concentration and purity were found to have a proportional relationship based on the CIEL * a * b * color system. The color of the traditional paper was assessed assessment shows green and yellow rather than red and blue. The DNA concentration demonstrated a positive linear correlation with the peaks of 992 cm −1 , 1599 cm −1 , and 1628 to 1638 cm −1 region, which were lignin-specific functional groups. The presence of lignin in traditional paper defines the colors green and yellow, which is related to the presence of a cell wall. The quantity of cell walls present is linked to DNA survival during the traditional papermaking process. Furthermore, the partial least square (PLS) regression model is established. The prediction model based on DNA, paper properties, and smoothing + the second derivative preprocessed attenuated total reflection-Fourier-transform infrared (ATR-FTIR) spectral data demonstrated valid purity predictions. The evaluation parameter of the cross-validated prediction model contains a low Root Mean Square Error of Cross-Validation (RMSECV) of 0.091 for DNA purity. The determination coefficient was close to 1. However, the further establishment of a validated DNA extraction methodology is required for the consistency of the prediction model for DNA concentration. The hierarchical clustering analysis demonstrated the agglomerative dendrogram on traditional paper samples. For the dendrogram, the Nasu paper mulberry (originating in northern Japan) was distinguished from another paper mulberry (originating in southwestern Japan) by clustering. By multivariate statistical analysis, the DNA presence and quality were predictable from the Japanese traditional papers. In addition, the clustering analysis provided the possible origin of paper mulberry materials for traditional papers. Based on the preliminary information, the need for DNA analysis on historical traditional paper can be determined.\",\"PeriodicalId\":13109,\"journal\":{\"name\":\"Heritage Science\",\"volume\":\"176 2\",\"pages\":\"0\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2023-10-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Heritage Science\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1186/s40494-023-01065-5\",\"RegionNum\":1,\"RegionCategory\":\"艺术学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, ANALYTICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Heritage Science","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1186/s40494-023-01065-5","RegionNum":1,"RegionCategory":"艺术学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, ANALYTICAL","Score":null,"Total":0}
引用次数: 0
摘要
传统造纸术是一项重大创新,在全球范围内激发了信息共享社会的兴趣。寻找隐藏在历史传统纸张背后的历史背景对于理解历史上的社会至关重要。先进的分子生物学研究被应用于许多法医研究,以确定起源和犯罪事件。然而,由于传统论文对样本的破坏,生物学研究回避了传统论文的传承科学。目前的研究探讨了传统纸张中的DNA与传统纸张特征的无损测量之间的皮尔逊相关性。基于CIEL * a * b *颜色系统,发现DNA浓度与纯度成正比关系。传统纸张的颜色被评估评估显示绿色和黄色而不是红色和蓝色。DNA浓度与木质素特异性官能团992 cm−1、1599 cm−1和1628 ~ 1638 cm−1区域的峰呈线性正相关。传统纸张中木质素的存在决定了绿色和黄色的颜色,这与细胞壁的存在有关。在传统的造纸过程中,细胞壁的数量与DNA的存活有关。在此基础上,建立了偏最小二乘回归模型。该预测模型基于DNA、纸张特性和平滑+二阶导数预处理的衰减全反射-傅里叶变换红外(ATR-FTIR)光谱数据,证明了纯度预测的有效性。交叉验证预测模型的评价参数对DNA纯度的交叉验证均方根误差(RMSECV)较低,为0.091。测定系数接近于1。然而,为了DNA浓度预测模型的一致性,需要进一步建立一种有效的DNA提取方法。分层聚类分析表明,传统纸质样品具有聚集性的树状图。在树形图上,通过聚类将原产于日本北部的那苏纸桑与原产于日本西南部的另一种纸桑区分开来。通过多元统计分析,预测了日本传统论文中DNA的存在和质量。此外,聚类分析为传统纸张提供了纸桑材料的可能来源。基于这些初步信息,可以确定对历史传统纸张进行DNA分析的必要性。
Multivariate statistical analysis on Japanese traditional papers, washi, for evaluation of DNA presence and quality
Abstract Traditional papermaking was a significant innovation that intrigued the information-sharing society in a wide range of the globe. The importance of finding the historical background hidden behind the historical traditional paper is critical to understanding societies in history. Advanced molecular biological research is applied to many forensic studies to identify the origin and criminal events. Yet, biological research refrained from the heritage science of traditional papers due to its damage to the samples. The current study explores the Pearson correlation between DNA in traditional paper and non-destructive measurement of characteristics of traditional paper. DNA concentration and purity were found to have a proportional relationship based on the CIEL * a * b * color system. The color of the traditional paper was assessed assessment shows green and yellow rather than red and blue. The DNA concentration demonstrated a positive linear correlation with the peaks of 992 cm −1 , 1599 cm −1 , and 1628 to 1638 cm −1 region, which were lignin-specific functional groups. The presence of lignin in traditional paper defines the colors green and yellow, which is related to the presence of a cell wall. The quantity of cell walls present is linked to DNA survival during the traditional papermaking process. Furthermore, the partial least square (PLS) regression model is established. The prediction model based on DNA, paper properties, and smoothing + the second derivative preprocessed attenuated total reflection-Fourier-transform infrared (ATR-FTIR) spectral data demonstrated valid purity predictions. The evaluation parameter of the cross-validated prediction model contains a low Root Mean Square Error of Cross-Validation (RMSECV) of 0.091 for DNA purity. The determination coefficient was close to 1. However, the further establishment of a validated DNA extraction methodology is required for the consistency of the prediction model for DNA concentration. The hierarchical clustering analysis demonstrated the agglomerative dendrogram on traditional paper samples. For the dendrogram, the Nasu paper mulberry (originating in northern Japan) was distinguished from another paper mulberry (originating in southwestern Japan) by clustering. By multivariate statistical analysis, the DNA presence and quality were predictable from the Japanese traditional papers. In addition, the clustering analysis provided the possible origin of paper mulberry materials for traditional papers. Based on the preliminary information, the need for DNA analysis on historical traditional paper can be determined.
期刊介绍:
Heritage Science is an open access journal publishing original peer-reviewed research covering:
Understanding of the manufacturing processes, provenances, and environmental contexts of material types, objects, and buildings, of cultural significance including their historical significance.
Understanding and prediction of physico-chemical and biological degradation processes of cultural artefacts, including climate change, and predictive heritage studies.
Development and application of analytical and imaging methods or equipments for non-invasive, non-destructive or portable analysis of artwork and objects of cultural significance to identify component materials, degradation products and deterioration markers.
Development and application of invasive and destructive methods for understanding the provenance of objects of cultural significance.
Development and critical assessment of treatment materials and methods for artwork and objects of cultural significance.
Development and application of statistical methods and algorithms for data analysis to further understanding of culturally significant objects.
Publication of reference and corpus datasets as supplementary information to the statistical and analytical studies above.
Description of novel technologies that can assist in the understanding of cultural heritage.