新型多表位结核分枝杆菌疫苗设计:免疫信息学策略

IF 0.2 Q4 Biochemistry, Genetics and Molecular Biology Research Journal of Biotechnology Pub Date : 2023-09-15 DOI:10.25303/1810rjbt060068
Dhayanitha Ranganathan Dhakshinamoorthy, Ramanathan Karuppasamy
{"title":"新型多表位结核分枝杆菌疫苗设计:免疫信息学策略","authors":"Dhayanitha Ranganathan Dhakshinamoorthy, Ramanathan Karuppasamy","doi":"10.25303/1810rjbt060068","DOIUrl":null,"url":null,"abstract":"Vaccination has proven to be an effective strategy for the prevention of tuberculosis (TB). Interestingly, peptide-based vaccines that elicit a specific immunological response are currently being explored as alternatives to the BCG vaccine. Thus, the present study aimed to design a novel, efficacious peptide-based vaccine against tuberculosis targeting Rv1115, a membrane protein and a potent stimulator of INF-γ. Initially, the immunodominant CD4+, CD8+ and B cell epitopes of Rv1115 were identified and scrutinized based on their propensity to evoke immunological responses. The propitious epitopes were then combined using the appropriate linkers (EAAAK, AAY, KK and GPGPG) and adjuvant (CobT) for the chimeric vaccine design. Further, the designed chimeric vaccine was subjected to 3D structure modelling, refinement and validation. Finally, the modelled vaccine construct was used for protein–protein docking studies with toll-like receptors 3 and 4 (TLR-3 and TLR-4) followed by immune simulation analysis and in silico cloning. Overall, the immunoinformatic results suggest that the developed chimeric vaccine could elicit robust immune responses and can be employed as an efficient preventative therapy for tuberculosis.","PeriodicalId":21091,"journal":{"name":"Research Journal of Biotechnology","volume":"36 1","pages":"0"},"PeriodicalIF":0.2000,"publicationDate":"2023-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Novel multi-epitope vaccine design against Mycobacterium tuberculosis: An Immunoinformatics strategy\",\"authors\":\"Dhayanitha Ranganathan Dhakshinamoorthy, Ramanathan Karuppasamy\",\"doi\":\"10.25303/1810rjbt060068\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Vaccination has proven to be an effective strategy for the prevention of tuberculosis (TB). Interestingly, peptide-based vaccines that elicit a specific immunological response are currently being explored as alternatives to the BCG vaccine. Thus, the present study aimed to design a novel, efficacious peptide-based vaccine against tuberculosis targeting Rv1115, a membrane protein and a potent stimulator of INF-γ. Initially, the immunodominant CD4+, CD8+ and B cell epitopes of Rv1115 were identified and scrutinized based on their propensity to evoke immunological responses. The propitious epitopes were then combined using the appropriate linkers (EAAAK, AAY, KK and GPGPG) and adjuvant (CobT) for the chimeric vaccine design. Further, the designed chimeric vaccine was subjected to 3D structure modelling, refinement and validation. Finally, the modelled vaccine construct was used for protein–protein docking studies with toll-like receptors 3 and 4 (TLR-3 and TLR-4) followed by immune simulation analysis and in silico cloning. Overall, the immunoinformatic results suggest that the developed chimeric vaccine could elicit robust immune responses and can be employed as an efficient preventative therapy for tuberculosis.\",\"PeriodicalId\":21091,\"journal\":{\"name\":\"Research Journal of Biotechnology\",\"volume\":\"36 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.2000,\"publicationDate\":\"2023-09-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Research Journal of Biotechnology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.25303/1810rjbt060068\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Research Journal of Biotechnology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.25303/1810rjbt060068","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0

摘要

疫苗接种已被证明是预防结核病的一项有效战略。有趣的是,目前正在探索可引起特定免疫反应的肽基疫苗作为卡介苗的替代品。因此,本研究旨在设计一种针对Rv1115的新型、有效的肽基结核病疫苗,Rv1115是一种膜蛋白和一种强效的INF-γ刺激物。首先,根据Rv1115的免疫优势CD4+、CD8+和B细胞表位引起免疫反应的倾向,鉴定并仔细检查了它们。然后使用合适的连接体(EAAAK, AAY, KK和GPGPG)和佐剂(CobT)将有利的表位组合在一起进行嵌合疫苗设计。此外,设计的嵌合疫苗进行了三维结构建模,改进和验证。最后,将模型疫苗构建体与toll样受体3和toll样受体4 (TLR-3和TLR-4)进行蛋白对接研究,随后进行免疫模拟分析和硅克隆。总体而言,免疫信息学结果表明,开发的嵌合疫苗可以引起强大的免疫反应,并可作为结核病的有效预防治疗方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Novel multi-epitope vaccine design against Mycobacterium tuberculosis: An Immunoinformatics strategy
Vaccination has proven to be an effective strategy for the prevention of tuberculosis (TB). Interestingly, peptide-based vaccines that elicit a specific immunological response are currently being explored as alternatives to the BCG vaccine. Thus, the present study aimed to design a novel, efficacious peptide-based vaccine against tuberculosis targeting Rv1115, a membrane protein and a potent stimulator of INF-γ. Initially, the immunodominant CD4+, CD8+ and B cell epitopes of Rv1115 were identified and scrutinized based on their propensity to evoke immunological responses. The propitious epitopes were then combined using the appropriate linkers (EAAAK, AAY, KK and GPGPG) and adjuvant (CobT) for the chimeric vaccine design. Further, the designed chimeric vaccine was subjected to 3D structure modelling, refinement and validation. Finally, the modelled vaccine construct was used for protein–protein docking studies with toll-like receptors 3 and 4 (TLR-3 and TLR-4) followed by immune simulation analysis and in silico cloning. Overall, the immunoinformatic results suggest that the developed chimeric vaccine could elicit robust immune responses and can be employed as an efficient preventative therapy for tuberculosis.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Research Journal of Biotechnology
Research Journal of Biotechnology 工程技术-生物工程与应用微生物
CiteScore
0.60
自引率
0.00%
发文量
192
审稿时长
1.5 months
期刊介绍: We invite you to contribute Research Papers / Short Communications / Review Papers: -In any field of Biotechnology, Biochemistry, Microbiology and Industrial Microbiology, Soil Technology, Agriculture Biotechnology. -in any field related to Food Biotechnology, Nutrition Biotechnology, Genetic Engineering and Commercial Biotechnology. -in any field of Biotechnology related to Drugs and Pharmaceutical products for human beings, animals and plants. -in any field related to Environmental Biotechnolgy, Waste Treatment of Liquids, Soilds and Gases; Sustainability. -in inter-realted field of Chemical Sciences, Biological Sciences, Environmental Sciences and Life Sciences. -in any field related to Biotechnological Engineering, Industrial Biotechnology and Instrumentation. -in any field related to Nano-technology. -in any field related to Plant Biotechnology.
期刊最新文献
Cultivation, Phytochemical screening and Antimicrobial analysis of caterpillar mushroom Cordyceps militaris and fruiting body In silico analysis of putative hemolysin proteins in the genome of Vibrio alginolyticus ATCC 17749 and their structure prediction Diversity of Fungal infections and Histopathological preparations of some economically important Fresh Water Fishes in Bhadra Reservoir Project, Karnataka, INDIA Detrimental Effects of Lithium on in vitro Seedlings of Pea (Vigna radiata) Isolation of Lactiplantibacillus plantarum producing Extracellular Lipase from Dairy Products and Optimization of the Enzyme Production
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1