{"title":"细菌在无序介质中的扩散,通过忘记介质","authors":"Henry H. Mattingly","doi":"arxiv-2311.10612","DOIUrl":null,"url":null,"abstract":"We study bacterial diffusion in disordered porous media. Interactions with\nobstacles, at unknown locations, make this problem challenging. We approach it\nby abstracting the environment to cell states with memoryless transitions. With\nthis, we derive an effective diffusivity that agrees well with simulations in\nexplicit geometries. The diffusivity is non-monotonic, and we solve the optimal\nrun length. We also find a rescaling that causes all of the theory and\nsimulations to collapse. Our results indicate that a small set of microscopic\nfeatures captures bacterial diffusion in disordered media.","PeriodicalId":501321,"journal":{"name":"arXiv - QuanBio - Cell Behavior","volume":"740 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Bacterial diffusion in disordered media, by forgetting the media\",\"authors\":\"Henry H. Mattingly\",\"doi\":\"arxiv-2311.10612\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"We study bacterial diffusion in disordered porous media. Interactions with\\nobstacles, at unknown locations, make this problem challenging. We approach it\\nby abstracting the environment to cell states with memoryless transitions. With\\nthis, we derive an effective diffusivity that agrees well with simulations in\\nexplicit geometries. The diffusivity is non-monotonic, and we solve the optimal\\nrun length. We also find a rescaling that causes all of the theory and\\nsimulations to collapse. Our results indicate that a small set of microscopic\\nfeatures captures bacterial diffusion in disordered media.\",\"PeriodicalId\":501321,\"journal\":{\"name\":\"arXiv - QuanBio - Cell Behavior\",\"volume\":\"740 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-11-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Cell Behavior\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2311.10612\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Cell Behavior","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2311.10612","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Bacterial diffusion in disordered media, by forgetting the media
We study bacterial diffusion in disordered porous media. Interactions with
obstacles, at unknown locations, make this problem challenging. We approach it
by abstracting the environment to cell states with memoryless transitions. With
this, we derive an effective diffusivity that agrees well with simulations in
explicit geometries. The diffusivity is non-monotonic, and we solve the optimal
run length. We also find a rescaling that causes all of the theory and
simulations to collapse. Our results indicate that a small set of microscopic
features captures bacterial diffusion in disordered media.