Alan Givré, Alejandro Colman-Lerner, Silvina Ponce Dawson
{"title":"振幅和频率编码为细胞提供了感知环境的不同视角","authors":"Alan Givré, Alejandro Colman-Lerner, Silvina Ponce Dawson","doi":"arxiv-2401.04089","DOIUrl":null,"url":null,"abstract":"Cells continuously sense their surroundings to detect modifications and\ngenerate responses. Very often changes in extracellular concentrations initiate\nsignaling cascades that eventually result in changes in gene expression.\nIncreasing stimulus strengths can be encoded in increasing concentration\namplitudes or increasing activation frequencies of intermediaries of the\npathway. In this Letter we show how the different way in which amplitude and\nfrequency encoding map environmental changes impact on the cell's information\ntransmission capabilities. While amplitude encoding is optimal for a limited\nrange of stimuli strengths around a finite value, frequency encoding\ninformation transmission can improve or remain relatively flat as the stimulus\nstrength increases. The apparently redundant combination of both mechanisms in\nsome cell types may then serve the purpose of expanding the range over which\nstimulus strengths can be reliably discriminated. In this Letter we also\ndiscuss a possible example of this mechanism.","PeriodicalId":501321,"journal":{"name":"arXiv - QuanBio - Cell Behavior","volume":"52 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Amplitude and Frequency encodings give cells a different lens to sense the environment\",\"authors\":\"Alan Givré, Alejandro Colman-Lerner, Silvina Ponce Dawson\",\"doi\":\"arxiv-2401.04089\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Cells continuously sense their surroundings to detect modifications and\\ngenerate responses. Very often changes in extracellular concentrations initiate\\nsignaling cascades that eventually result in changes in gene expression.\\nIncreasing stimulus strengths can be encoded in increasing concentration\\namplitudes or increasing activation frequencies of intermediaries of the\\npathway. In this Letter we show how the different way in which amplitude and\\nfrequency encoding map environmental changes impact on the cell's information\\ntransmission capabilities. While amplitude encoding is optimal for a limited\\nrange of stimuli strengths around a finite value, frequency encoding\\ninformation transmission can improve or remain relatively flat as the stimulus\\nstrength increases. The apparently redundant combination of both mechanisms in\\nsome cell types may then serve the purpose of expanding the range over which\\nstimulus strengths can be reliably discriminated. In this Letter we also\\ndiscuss a possible example of this mechanism.\",\"PeriodicalId\":501321,\"journal\":{\"name\":\"arXiv - QuanBio - Cell Behavior\",\"volume\":\"52 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-01-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Cell Behavior\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2401.04089\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Cell Behavior","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2401.04089","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Amplitude and Frequency encodings give cells a different lens to sense the environment
Cells continuously sense their surroundings to detect modifications and
generate responses. Very often changes in extracellular concentrations initiate
signaling cascades that eventually result in changes in gene expression.
Increasing stimulus strengths can be encoded in increasing concentration
amplitudes or increasing activation frequencies of intermediaries of the
pathway. In this Letter we show how the different way in which amplitude and
frequency encoding map environmental changes impact on the cell's information
transmission capabilities. While amplitude encoding is optimal for a limited
range of stimuli strengths around a finite value, frequency encoding
information transmission can improve or remain relatively flat as the stimulus
strength increases. The apparently redundant combination of both mechanisms in
some cell types may then serve the purpose of expanding the range over which
stimulus strengths can be reliably discriminated. In this Letter we also
discuss a possible example of this mechanism.