将细胞随机性纳入固液混合物生物膜模型

Ana Carpio, Elena Cebrian
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引用次数: 0

摘要

细胞聚集体的动力学是由机械化学过程和细胞活动的相互作用驱动的。虽然确定性模型可以捕捉机械特征,但局部化学波动会触发随机细胞反应,从而决定整体演化。将随机细胞行为纳入生物介质的宏观模型是一项具有挑战性的任务。在这里,我们提出了细菌生物膜生长的混合模型,它将机械和化学领域的两相固体/流体混合物描述与细菌活动的基于动态能量预算的细胞自动机处理相结合。通过对相关界面进行薄膜和板近似处理,我们得到的数值解展现了在实验中观察到的行为,如由于从环境中摄入水分而加速扩散、皱纹形成、轮廓起伏发展,以及执行不同任务的分化细菌出现不均匀分布。
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Incorporating Cellular Stochasticity in Solid--Fluid Mixture Biofilm Models
The dynamics of cellular aggregates is driven by the interplay of mechanochemical processes and cellular activity. Although deterministic models may capture mechanical features, local chemical fluctuations trigger random cell responses, which determine the overall evolution. Incorporating stochastic cellular behavior in macroscopic models of biological media is a challenging task. Herein, we propose hybrid models for bacterial biofilm growth, which couple a two phase solid/fluid mixture description of mechanical and chemical fields with a dynamic energy budget-based cellular automata treatment of bacterial activity. Thin film and plate approximations for the relevant interfaces allow us to obtain numerical solutions exhibiting behaviors observed in experiments, such as accelerated spread due to water intake from the environment, wrinkle formation, undulated contour development, and the appearance of inhomogeneous distributions of differentiated bacteria performing varied tasks.
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