Muhammad Naveed, Rida Naveed, Tariq Aziz, Arooj Azeem, Mahrukh Afzal, Muhammad Waseem, Metab Alharbi, Abdulrahman Alshammari, Abdullah F. Alasmari, Thamer H. Albekairi
{"title":"通过体外鉴定白僵菌和 ABH 酶的计算途径分析实现聚氯乙烯的生物降解。","authors":"Muhammad Naveed, Rida Naveed, Tariq Aziz, Arooj Azeem, Mahrukh Afzal, Muhammad Waseem, Metab Alharbi, Abdulrahman Alshammari, Abdullah F. Alasmari, Thamer H. Albekairi","doi":"10.1007/s10532-023-10064-z","DOIUrl":null,"url":null,"abstract":"<div><p>Microplastics pose significant challenges to ecosystems and organisms. They can be ingested by marine and terrestrial species, leading to potential health risks and ecological disruptions. This study aims to address the urgent need for effective remediation strategies by focusing on the biodegradation of microplastics, specifically polyvinyl chloride (PVC) derivatives, using the bacterial strain <i>Bacillus albus</i>. The study provides a comprehensive background on the accumulation of noxious substances in the environment and the importance of harnessing biodegradation as an eco-friendly method for pollutant elimination. The specific objective is to investigate the enzymatic capabilities of <i>Bacillus albus</i>, particularly the alpha/beta hydrolases (ABH), in degrading microplastics. To achieve this, in-silico studies were conducted, including analysis of the ABH protein sequence and its interaction with potential inhibitors targeting PVC derivatives. Docking scores of − 7.2 kcal/mol were obtained to evaluate the efficacy of the interactions. The study demonstrates the promising bioremediation prospects of <i>Bacillus albus</i> for microplastics, highlighting its potential as a key player in addressing microplastic pollution. The findings underscore the urgent need for further experimental validation and practical implementation of <i>Bacillus albus</i> in environmental remediation strategies.</p></div>","PeriodicalId":486,"journal":{"name":"Biodegradation","volume":"35 4","pages":"451 - 468"},"PeriodicalIF":3.1000,"publicationDate":"2024-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Biodegradation of PVCs through in-vitro identification of Bacillus albus and computational pathway analysis of ABH enzyme\",\"authors\":\"Muhammad Naveed, Rida Naveed, Tariq Aziz, Arooj Azeem, Mahrukh Afzal, Muhammad Waseem, Metab Alharbi, Abdulrahman Alshammari, Abdullah F. Alasmari, Thamer H. Albekairi\",\"doi\":\"10.1007/s10532-023-10064-z\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Microplastics pose significant challenges to ecosystems and organisms. They can be ingested by marine and terrestrial species, leading to potential health risks and ecological disruptions. This study aims to address the urgent need for effective remediation strategies by focusing on the biodegradation of microplastics, specifically polyvinyl chloride (PVC) derivatives, using the bacterial strain <i>Bacillus albus</i>. The study provides a comprehensive background on the accumulation of noxious substances in the environment and the importance of harnessing biodegradation as an eco-friendly method for pollutant elimination. The specific objective is to investigate the enzymatic capabilities of <i>Bacillus albus</i>, particularly the alpha/beta hydrolases (ABH), in degrading microplastics. To achieve this, in-silico studies were conducted, including analysis of the ABH protein sequence and its interaction with potential inhibitors targeting PVC derivatives. Docking scores of − 7.2 kcal/mol were obtained to evaluate the efficacy of the interactions. The study demonstrates the promising bioremediation prospects of <i>Bacillus albus</i> for microplastics, highlighting its potential as a key player in addressing microplastic pollution. 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Biodegradation of PVCs through in-vitro identification of Bacillus albus and computational pathway analysis of ABH enzyme
Microplastics pose significant challenges to ecosystems and organisms. They can be ingested by marine and terrestrial species, leading to potential health risks and ecological disruptions. This study aims to address the urgent need for effective remediation strategies by focusing on the biodegradation of microplastics, specifically polyvinyl chloride (PVC) derivatives, using the bacterial strain Bacillus albus. The study provides a comprehensive background on the accumulation of noxious substances in the environment and the importance of harnessing biodegradation as an eco-friendly method for pollutant elimination. The specific objective is to investigate the enzymatic capabilities of Bacillus albus, particularly the alpha/beta hydrolases (ABH), in degrading microplastics. To achieve this, in-silico studies were conducted, including analysis of the ABH protein sequence and its interaction with potential inhibitors targeting PVC derivatives. Docking scores of − 7.2 kcal/mol were obtained to evaluate the efficacy of the interactions. The study demonstrates the promising bioremediation prospects of Bacillus albus for microplastics, highlighting its potential as a key player in addressing microplastic pollution. The findings underscore the urgent need for further experimental validation and practical implementation of Bacillus albus in environmental remediation strategies.
期刊介绍:
Biodegradation publishes papers, reviews and mini-reviews on the biotransformation, mineralization, detoxification, recycling, amelioration or treatment of chemicals or waste materials by naturally-occurring microbial strains, microbial associations, or recombinant organisms.
Coverage spans a range of topics, including Biochemistry of biodegradative pathways; Genetics of biodegradative organisms and development of recombinant biodegrading organisms; Molecular biology-based studies of biodegradative microbial communities; Enhancement of naturally-occurring biodegradative properties and activities. Also featured are novel applications of biodegradation and biotransformation technology, to soil, water, sewage, heavy metals and radionuclides, organohalogens, high-COD wastes, straight-, branched-chain and aromatic hydrocarbons; Coverage extends to design and scale-up of laboratory processes and bioreactor systems. Also offered are papers on economic and legal aspects of biological treatment of waste.