简化多模式临床研究数据管理:引入用户友好的综合数据库概念。

IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Applied Clinical Informatics Pub Date : 2024-03-01 Epub Date: 2024-02-01 DOI:10.1055/a-2259-0008
Anna Schweinar, Franziska Wagner, Carsten Klingner, Sven Festag, Cord Spreckelsen, Stefan Brodoehl
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引用次数: 0

摘要

背景 临床研究,尤其是科学数据方面的研究,一直在努力有效管理多模态和纵向临床数据。特别是在神经科学领域,大量的异构纵向数据给研究人员带来了挑战。虽然当前的研究数据管理系统(RDM)提供了丰富的功能,但其架构复杂,难以安装和维护,需要大量的用户培训。目标 我们的重点是开发和展示一种数据管理方法,专门为参与积极患者护理的临床研究人员量身定制,尤其是在德国大学医院的神经科学环境中。我们的设计考虑了 FAIR(可查找、可访问、可互操作、可重用)原则的实施以及敏感数据的安全处理,以符合《一般数据保护条例》(GDPR)。方法 我们引入了一种简化的数据库概念,其特点是采用 HTML5/CSS 技术构建直观的图形界面。该系统可以毫不费力地部署在本地网络中,即 Microsoft Windows 10 环境中。我们的设计融入了 FAIR 原则,以实现有效的数据管理。此外,我们还通过 HL7 CDA 等既定标准简化了数据交换。为确保数据完整性,我们在数据导入和输入过程中集成了实时验证机制,其中包括数据类型、可信度和临床质量语言(CQL)逻辑。结果 我们利用一个样本数据集,与临床医生一起开发并评估了我们的概念,该样本数据集的受试者在三年时间内到我们的记忆诊所就诊,并收集了多个多模态临床参数。一个显著的优点是统一的数据矩阵简化了数据汇总、匿名化和导出。这简化了数据交换,增强了与 KNIME 等平台的数据库集成。结论 我们的方法在采集和管理临床研究数据方面取得了重大进展,特别适合在有限的 IT 基础设施内运行的小规模项目。它专为临床医生和研究人员的即时、无障碍部署而设计。数据库模板和用户界面的预编译版本可从以下网址获取:https://github.com/stebro01/research_database_sqlite_i2b2.git。
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Simplifying Multimodal Clinical Research Data Management: Introducing an Integrated and User-friendly Database Concept.

Background:  Clinical research, particularly in scientific data, grapples with the efficient management of multimodal and longitudinal clinical data. Especially in neuroscience, the volume of heterogeneous longitudinal data challenges researchers. While current research data management systems offer rich functionality, they suffer from architectural complexity that makes them difficult to install and maintain and require extensive user training.

Objectives:  The focus is the development and presentation of a data management approach specifically tailored for clinical researchers involved in active patient care, especially in the neuroscientific environment of German university hospitals. Our design considers the implementation of FAIR (Findable, Accessible, Interoperable, and Reusable) principles and the secure handling of sensitive data in compliance with the General Data Protection Regulation.

Methods:  We introduce a streamlined database concept, featuring an intuitive graphical interface built on Hypertext Markup Language revision 5 (HTML5)/Cascading Style Sheets (CSS) technology. The system can be effortlessly deployed within local networks, that is, in Microsoft Windows 10 environments. Our design incorporates FAIR principles for effective data management. Moreover, we have streamlined data interchange through established standards like HL7 Clinical Document Architecture (CDA). To ensure data integrity, we have integrated real-time validation mechanisms that cover data type, plausibility, and Clinical Quality Language logic during data import and entry.

Results:  We have developed and evaluated our concept with clinicians using a sample dataset of subjects who visited our memory clinic over a 3-year period and collected several multimodal clinical parameters. A notable advantage is the unified data matrix, which simplifies data aggregation, anonymization, and export. THIS STREAMLINES DATA EXCHANGE AND ENHANCES DATABASE INTEGRATION WITH PLATFORMS LIKE KONSTANZ INFORMATION MINER (KNIME): .

Conclusion:  Our approach offers a significant advancement for capturing and managing clinical research data, specifically tailored for small-scale initiatives operating within limited information technology (IT) infrastructures. It is designed for immediate, hassle-free deployment by clinicians and researchers.The database template and precompiled versions of the user interface are available at: https://github.com/stebro01/research_database_sqlite_i2b2.git.

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来源期刊
Applied Clinical Informatics
Applied Clinical Informatics MEDICAL INFORMATICS-
CiteScore
4.60
自引率
24.10%
发文量
132
期刊介绍: ACI is the third Schattauer journal dealing with biomedical and health informatics. It perfectly complements our other journals Öffnet internen Link im aktuellen FensterMethods of Information in Medicine and the Öffnet internen Link im aktuellen FensterYearbook of Medical Informatics. The Yearbook of Medical Informatics being the “Milestone” or state-of-the-art journal and Methods of Information in Medicine being the “Science and Research” journal of IMIA, ACI intends to be the “Practical” journal of IMIA.
期刊最新文献
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