利用固态核磁共振技术重建脂质体中的酵母 OST 亚基 Ost4 及其关键突变体 Ost4V23D 并确定其共振分布。

IF 1.3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular NMR Pub Date : 2024-02-29 DOI:10.1007/s10858-024-00437-8
Bharat P. Chaudhary, Jochem Struppe, Hem Moktan, David Zoetewey, Donghua H. Zhou, Smita Mohanty
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引用次数: 0

摘要

在生命的各个领域中,N-连接糖基化都是一种重要且高度保守的蛋白质共翻译和翻译后修饰。在人类中,N-连接糖基化途径的遗传缺陷会导致统称为 "先天性糖基化紊乱 "的代谢性疾病。在这种修饰反应中,富含甘露糖的寡糖从脂质连接的供体底物转移到新生蛋白质的-N-X-T/S-序列(其中X≠脯氨酸)中的特定天冬酰胺侧链上。低聚糖基转移酶(OST)是真核生物中催化这种糖基化反应的一种多亚基膜嵌入酶。在酵母中,Ost4 是九个亚基中最小的一个,是催化亚基 Stt3 与 Ost3(或其同源物 Ost6)相互作用的桥梁。将 Ost4 中任何 C 端疏水残基突变为带电残基都会破坏酶的稳定性并对其功能产生负面影响。具体来说,V23D 突变会导致酵母的温度敏感表型。在此,我们报告了纯化重组 Ost4 和 Ost4V23D 各自在 POPC/POPE 脂质双分子层中的重组情况,以及利用异核二维和三维固态 NMR 与魔角旋光对它们进行的共振分配。V23D 突变后,Ost4 的化学位移发生了显著变化,表明其化学环境发生了巨大变化。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Reconstitution and resonance assignments of yeast OST subunit Ost4 and its critical mutant Ost4V23D in liposomes by solid-state NMR

N-linked glycosylation is an essential and highly conserved co- and post-translational protein modification in all domains of life. In humans, genetic defects in N-linked glycosylation pathways result in metabolic diseases collectively called Congenital Disorders of Glycosylation. In this modification reaction, a mannose rich oligosaccharide is transferred from a lipid-linked donor substrate to a specific asparagine side-chain within the -N-X-T/S- sequence (where X ≠ Proline) of the nascent protein. Oligosaccharyltransferase (OST), a multi-subunit membrane embedded enzyme catalyzes this glycosylation reaction in eukaryotes. In yeast, Ost4 is the smallest of nine subunits and bridges the interaction of the catalytic subunit, Stt3, with Ost3 (or its homolog, Ost6). Mutations of any C-terminal hydrophobic residues in Ost4 to a charged residue destabilizes the enzyme and negatively impacts its function. Specifically, the V23D mutation results in a temperature-sensitive phenotype in yeast. Here, we report the reconstitution of both purified recombinant Ost4 and Ost4V23D each in a POPC/POPE lipid bilayer and their resonance assignments using heteronuclear 2D and 3D solid-state NMR with magic-angle spinning. The chemical shifts of Ost4 changed significantly upon the V23D mutation, suggesting a dramatic change in its chemical environment.

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来源期刊
Journal of Biomolecular NMR
Journal of Biomolecular NMR 生物-光谱学
CiteScore
6.00
自引率
3.70%
发文量
19
审稿时长
6-12 weeks
期刊介绍: The Journal of Biomolecular NMR provides a forum for publishing research on technical developments and innovative applications of nuclear magnetic resonance spectroscopy for the study of structure and dynamic properties of biopolymers in solution, liquid crystals, solids and mixed environments, e.g., attached to membranes. This may include: Three-dimensional structure determination of biological macromolecules (polypeptides/proteins, DNA, RNA, oligosaccharides) by NMR. New NMR techniques for studies of biological macromolecules. Novel approaches to computer-aided automated analysis of multidimensional NMR spectra. Computational methods for the structural interpretation of NMR data, including structure refinement. Comparisons of structures determined by NMR with those obtained by other methods, e.g. by diffraction techniques with protein single crystals. New techniques of sample preparation for NMR experiments (biosynthetic and chemical methods for isotope labeling, preparation of nutrients for biosynthetic isotope labeling, etc.). An NMR characterization of the products must be included.
期刊最新文献
Perspective: on the importance of extensive, high-quality and reliable deposition of biomolecular NMR data in the age of artificial intelligence. 19F NMR relaxation of buried tryptophan side chains suggest anisotropic rotational diffusion of the protein RfaH. Pitfalls in measurements of R1 relaxation rates of protein backbone 15N nuclei. Towards cost-effective side-chain isotope labelling of proteins expressed in human cells. Optimising in-cell NMR acquisition for nucleic acids.
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