识别蛋白质致病突变的计算方法。

3区 生物学 Q1 Biochemistry, Genetics and Molecular Biology Advances in protein chemistry and structural biology Pub Date : 2024-01-01 Epub Date: 2023-12-20 DOI:10.1016/bs.apcsb.2023.11.007
Medha Pandey, Suraj Kumar Shah, M Michael Gromiha
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引用次数: 0

摘要

基因组测序技术的进步扩大了对不同疾病蛋白质突变的研究范围。蛋白质中的氨基酸突变会改变其结构、稳定性和功能,其中一些突变会导致疾病。鉴定致病突变是一项具有挑战性的任务,它将有助于设计治疗策略。因此,文献中的突变数据已被整理并存储在多个数据库中,这些数据库已被有效地用于开发计算方法,利用蛋白质的序列和结构特性来识别有害突变(驱动因素)。在本章中,我们将介绍一些特定数据库的内容,这些数据库拥有致病突变和中性突变的信息,以及基于序列和结构的特性。此外,还将讨论致病突变的特征,以及识别蛋白质中癌症热点残基和致病突变的计算方法。
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Computational approaches for identifying disease-causing mutations in proteins.

Advancements in genome sequencing have expanded the scope of investigating mutations in proteins across different diseases. Amino acid mutations in a protein alter its structure, stability and function and some of them lead to diseases. Identification of disease-causing mutations is a challenging task and it will be helpful for designing therapeutic strategies. Hence, mutation data available in the literature have been curated and stored in several databases, which have been effectively utilized for developing computational methods to identify deleterious mutations (drivers), using sequence and structure-based properties of proteins. In this chapter, we describe the contents of specific databases that have information on disease-causing and neutral mutations followed by sequence and structure-based properties. Further, characteristic features of disease-causing mutations will be discussed along with computational methods for identifying cancer hotspot residues and disease-causing mutations in proteins.

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来源期刊
Advances in protein chemistry and structural biology
Advances in protein chemistry and structural biology BIOCHEMISTRY & MOLECULAR BIOLOGY-
CiteScore
7.40
自引率
0.00%
发文量
66
审稿时长
>12 weeks
期刊介绍: Published continuously since 1944, The Advances in Protein Chemistry and Structural Biology series has been the essential resource for protein chemists. Each volume brings forth new information about protocols and analysis of proteins. Each thematically organized volume is guest edited by leading experts in a broad range of protein-related topics.
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