细胞迁移随机模型和平均场模型中的粘附建模

Shahzeb Raja Noureen, Richard L. Mort, Christian A. Yates
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引用次数: 0

摘要

细胞之间的粘附在许多生物过程中发挥着重要作用,如组织形态发生和稳态、伤口愈合和癌细胞转移。虽然这些模型能很好地代表某些生物情况,但细胞波特模型的计算成本很高,而连续模型只能捕捉细胞群的宏观行为,忽略了随机性和细胞动态的离散性。细胞自动机模型可以解决这些问题,并可用于多种生物系统。在本文中,我们考虑了一种细胞自动机方法,并针对由两种细胞类型组成的群体中的细胞迁移和粘附问题开发了一种基于晶格上代理的模型(ABM)。通过推导和比较与 ABM 对应的 PDE,我们证明细胞聚集和细胞排序在 PDE 模型中是不可能的。因此,我们提出了一套随机均值方程(SMEs),它能更好地捕捉 ABM 在一维和二维中的行为。
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Modelling adhesion in stochastic and mean-field models of cell migration
Adhesion between cells plays an important role in many biological processes such as tissue morphogenesis and homeostasis, wound healing and cancer cell metastasis. From a mathematical perspective, adhesion between multiple cell types has been previously analysed using discrete and continuum models including the Cellular Potts models and partial differential equations (PDEs). While these models can represent certain biological situations well, Cellular Potts models can be computationally expensive and continuum models only capture the macroscopic behaviour of a population of cells, ignoring stochasticity and the discrete nature of cell dynamics. Cellular automaton models allow us to address these problems and can be used for a wide variety of biological systems. In this paper, we consider a cellular automaton approach and develop an on-lattice agent-based model (ABM) for cell migration and adhesion in a population composed of two cell types. By deriving and comparing the corresponding PDEs to the ABM, we demonstrate that cell aggregation and cell sorting are not possible in the PDE model. Therefore, we propose a set of stochastic mean equations (SMEs) which better capture the behaviour of the ABM in one and two dimensions.
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