视网膜鸟苷酸环化酶活化蛋白 5 (GCAP5) 的核磁共振结构,R22A 突变可消除二聚化并增强环化酶活化。

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemistry Biochemistry Pub Date : 2024-04-25 DOI:10.1021/acs.biochem.4c00046
Diana L. Cudia, Effibe O. Ahoulou, Aritra Bej, Annika N. Janssen, Alexander Scholten, Karl-W. Koch and James B. Ames*, 
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引用次数: 0

摘要

斑马鱼感光器中的鸟苷酸环化酶活化蛋白-5(GCAP5)能促进膜受体视网膜鸟苷酸环化酶(GC-E)的活化。此前,我们发现 GCAP5 的 R22A 突变(GCAP5R22A)会取消 GCAP5 的二聚化,与野生型 GCAP5(GCAP5WT)相比,GC-E 的激活率提高了 3 倍以上。在此,我们对 GCAP5R22A 进行了 ITC、NMR 和功能分析,以了解 R22A 如何导致二聚化亲和力降低和环化酶活化增加。ITC 实验显示,GCAP5R22A 总共结合了 3 个 Ca2+,包括两个纳摩尔范围内的位点和一个微摩尔位点。ITC 未检测到 GCAP5WT 中的两个纳摩尔位点,这表明 R22A 可能会影响 Ca2+ 与这些位点的结合。除了 R22A 附近的局部差异(Q19、W20、Y21 和 K23)以及 C 端螺旋靠近 N 端肉豆蔻酸酯的方向改变之外,GCAP5R22A 的核磁共振衍生结构总体上与 GCAP5WT 相似(RMSD = 2.3 Å)。GCAP5R22A 在 R22 和 D71 之间缺乏分子间盐桥,这可能是二聚化减弱的原因。我们提出了 GCAP5 与 GC-E 结合的结构模型,其中 R22 侧链与 GC-E 中暴露的疏水残基接触。环化酶测定表明,与 GCAP5WT 相比,GC-E 与 GCAP5R22A 结合的亲和力要高出 25%,这与 R22A 更有利的疏水接触是一致的,这可能有助于解释环化酶活化作用增强的原因。
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NMR Structure of Retinal Guanylate Cyclase Activating Protein 5 (GCAP5) with R22A Mutation That Abolishes Dimerization and Enhances Cyclase Activation

Guanylate cyclase activating protein-5 (GCAP5) in zebrafish photoreceptors promotes the activation of membrane receptor retinal guanylate cyclase (GC-E). Previously, we showed the R22A mutation in GCAP5 (GCAP5R22A) abolishes dimerization of GCAP5 and activates GC-E by more than 3-fold compared to that of wild-type GCAP5 (GCAP5WT). Here, we present ITC, NMR, and functional analysis of GCAP5R22A to understand how R22A causes a decreased dimerization affinity and increased cyclase activation. ITC experiments reveal GCAP5R22A binds a total of 3 Ca2+, including two sites in the nanomolar range followed by a single micromolar site. The two nanomolar sites in GCAP5WT were not detected by ITC, suggesting that R22A may affect the binding of Ca2+ to these sites. The NMR-derived structure of GCAP5R22A is overall similar to that of GCAP5WT (RMSD = 2.3 Å), except for local differences near R22A (Q19, W20, Y21, and K23) and an altered orientation of the C-terminal helix near the N-terminal myristate. GCAP5R22A lacks an intermolecular salt bridge between R22 and D71 that may explain the weakened dimerization. We present a structural model of GCAP5 bound to GC-E in which the R22 side-chain contacts exposed hydrophobic residues in GC-E. Cyclase assays suggest that GC-E binds to GCAP5R22A with ∼25% higher affinity compared to GCAP5WT, consistent with more favorable hydrophobic contact by R22A that may help explain the increased cyclase activation.

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来源期刊
Biochemistry Biochemistry
Biochemistry Biochemistry 生物-生化与分子生物学
CiteScore
5.50
自引率
3.40%
发文量
336
审稿时长
1-2 weeks
期刊介绍: Biochemistry provides an international forum for publishing exceptional, rigorous, high-impact research across all of biological chemistry. This broad scope includes studies on the chemical, physical, mechanistic, and/or structural basis of biological or cell function, and encompasses the fields of chemical biology, synthetic biology, disease biology, cell biology, nucleic acid biology, neuroscience, structural biology, and biophysics. In addition to traditional Research Articles, Biochemistry also publishes Communications, Viewpoints, and Perspectives, as well as From the Bench articles that report new methods of particular interest to the biological chemistry community.
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