生存数据的随机森林:哪些方法在哪些条件下最有效?

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2024-04-24 DOI:10.1515/ijb-2023-0056
Matthew Berkowitz, Rachel MacKay Altman, Thomas M. Loughin
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引用次数: 0

摘要

文献中很少对构建生存树和生存林的方法进行系统比较。重要的是,当目标是预测生存时间或估计生存函数时,最佳方法的选择并不明确。我们利用广泛的模拟研究,系统地调查了影响生存森林性能的各种因素--森林构建方法、删减、样本大小、响应的分布、线性预测因子的结构以及相关或噪声协变量的存在。我们特别研究了最近在文献中提出的 11 种方法,并确定了 6 种表现最佳的方法。我们发现,我们研究的所有因素都对这些方法的生存时间点预测和生存函数估计的相对准确性有重大影响。我们利用研究结果为在特定情况下使用哪种方法提出了建议,并为观察到的相对性能差异提供了解释。
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Random forests for survival data: which methods work best and under what conditions?
Few systematic comparisons of methods for constructing survival trees and forests exist in the literature. Importantly, when the goal is to predict a survival time or estimate a survival function, the optimal choice of method is unclear. We use an extensive simulation study to systematically investigate various factors that influence survival forest performance – forest construction method, censoring, sample size, distribution of the response, structure of the linear predictor, and presence of correlated or noisy covariates. In particular, we study 11 methods that have recently been proposed in the literature and identify 6 top performers. We find that all the factors that we investigate have significant impact on the methods’ relative accuracy of point predictions of survival times and survival function estimates. We use our results to make recommendations for which methods to use in a given context and offer explanations for the observed differences in relative performance.
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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