通过硅学方法鉴定乳腺癌 ERα 靶点的新型抑制剂

Veerachamy Alagarsamy, Mohaideen Thasthagir Sulthana, Bandi Narendhar, Viswas Raja Solomon, Manavalan Gobinath, Aithamraju Satishchandra, Dubudam Sangeetha, Sankaraanarayanan Murugesan
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引用次数: 0

摘要

背景:雌激素α被认为是乳腺癌细胞增殖的危险因素,随着选择性雌激素受体调节剂(SERMs)的开发,雌激素α在乳腺癌化疗中得到了有效治疗:本研究的主要目的是通过对 17 种药用植物中的 115 种植物化学物质进行分子对接研究,找出针对最具影响力的 ERα 受体靶点的潜在抑制剂:采用Auto Dock Vina程序的遗传算法进行分子对接研究,并利用薛定谔分子建模的Desmond工具进行分子动力学(MD)模拟,对对接进行验证。采用 SWISS ADME 和 ProTox-II 进行了 ADME( T) 研究:结果表明:结合能最高的前十种植物化学物质分别是乙酸amyrin(-10.7 kcal/mol)、uscharine(-10.5 kcal/mol)、voruscharin(-10.0 kcal/mol)、cyclitols(-10.0 kcal/mol)、乙酸蒲公英酯(-9.9 kcal/mol)、amyrin(-9.9 kcal/mol)、barringtogenol C(-9.9 kcal/mol)、calactin(-9.9 kcal/mol)、3-beta taraxerol(-9.8 kcal/mol)和 calotoxin(-9.8 kcal/mol)。分子对接研究显示,与参考标准他莫昔芬(-6.6 kcal/mol)相比,这些植物化学成分与靶蛋白ERα的结合亲和力更高。MD 研究结果表明,与他莫昔芬- ERα 复合物相比,所有四种测试化合物与 ERα 靶蛋白都具有相对稳定的配体-蛋白复合物:结论:在这十种化合物中,植物化学物质乙酸amyrin(三萜类化合物)与标准他莫昔芬相比,能形成更稳定的复合物,并表现出更强的结合亲和力。对前十种植物化学物质的 ADMET 研究表明,它们具有良好的安全性。此外,本研究还首次报道了这些化合物可能作为ERα的抑制剂,通过采用药物再利用的概念来治疗乳腺癌。因此,可以进一步研究这些植物化学物质,并将其作为母体核心分子来开发治疗乳腺癌的新型先导分子。
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Identification of Novel Inhibitors for ERα Target of Breast Cancer By In Silico Approach.

Background: Estrogen alpha has been recognized as a perilous factor in breast cancer cell proliferation and has been proficiently treated in breast cancer chemotherapy with the development of selective estrogen receptor modulators (SERMs).

Objectives: The major aim of this study was to identify the potential inhibitors against the most influential target ERα receptor by in silico studies of 115 phytochemicals from 17 medicinal plants using in silico molecular docking studies.

Methods: The molecular docking investigation was carried out by a genetic algorithm using the Auto Dock Vina program, and the validation of docking was also performed using molecular dynamic (MD) simulation by the Desmond tool of Schrödinger molecular modeling. The ADME( T) studies were performed by SWISS ADME and ProTox-II.

Results: The top ten highest binding energy phytochemicals identified were amyrin acetate (- 10.7 kcal/mol), uscharine (-10.5 kcal/mol), voruscharin (-10.0 kcal/mol), cyclitols (-10.0 kcal/mol), taraxeryl acetate (-9.9 kcal/mol), amyrin (-9.9 kcal/mol), barringtogenol C (-9.9 kcal/mol), calactin (-9.9 kcal/mol), 3-beta taraxerol (-9.8 kcal/mol), and calotoxin (-9.8 kcal/mol). A molecular docking study revealed that these phytochemical constituents showed higher binding affinity compared to the reference standard tamoxifen (-6.6 kcal/mol) towards the target protein ERα. The results of MD studies showed that all four tested compounds possess comparatively stable ligand-protein complexes with ERα target as compared to the tamoxifen- ERα complex.

Conclusion: Among the ten compounds, phytochemical amyrin acetate (triterpenoids) formed a more stable complex as well as exhibited greater binding affinity than standard tamoxifen. ADMET studies for the top ten phytochemicals showed a good safety profile. Additionally, these compounds are being reported for the first time in this study as possible inhibitors of ERα for the treatment of breast cancer by adopting the concept of drug repurposing. Hence, these phytochemicals can be further studied and can be used as a parent core molecule to develop novel lead molecules for breast cancer therapy.

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