采用分流变压器和三维可变形卷积的深度学习架构,用于头颈部肿瘤体素级剂量预测。

IF 2.4 4区 医学 Q3 ENGINEERING, BIOMEDICAL Physical and Engineering Sciences in Medicine Pub Date : 2024-08-05 DOI:10.1007/s13246-024-01462-5
Liting Chen, Hongfei Sun, Zhongfei Wang, Te Zhang, Hailang Zhang, Wei Wang, Xiaohuan Sun, Jie Duan, Yue Gao, Lina Zhao
{"title":"采用分流变压器和三维可变形卷积的深度学习架构,用于头颈部肿瘤体素级剂量预测。","authors":"Liting Chen, Hongfei Sun, Zhongfei Wang, Te Zhang, Hailang Zhang, Wei Wang, Xiaohuan Sun, Jie Duan, Yue Gao, Lina Zhao","doi":"10.1007/s13246-024-01462-5","DOIUrl":null,"url":null,"abstract":"<p><p>Intensity-modulated radiation therapy (IMRT) has been widely used in treating head and neck tumors. However, due to the complex anatomical structures in the head and neck region, it is challenging for the plan optimizer to rapidly generate clinically acceptable IMRT treatment plans. A novel deep learning multi-scale Transformer (MST) model was developed in the current study aiming to accelerate the IMRT planning for head and neck tumors while generating more precise prediction of the voxel-level dose distribution. The proposed end-to-end MST model employs the shunted Transformer to capture multi-scale features and learn a global dependency, and utilizes 3D deformable convolution bottleneck blocks to extract shape-aware feature and compensate the loss of spatial information in the patch merging layers. Moreover, data augmentation and self-knowledge distillation are used to further improve the prediction performance of the model. The MST model was trained and evaluated on the OpenKBP Challenge dataset. Its prediction accuracy was compared with three previous dose prediction models: C3D, TrDosePred, and TSNet. The predicted dose distributions of our proposed MST model in the tumor region are closest to the original clinical dose distribution. The MST model achieves the dose score of 2.23 Gy and the DVH score of 1.34 Gy on the test dataset, outperforming the other three models by 8%-17%. For clinical-related DVH dosimetric metrics, the prediction accuracy in terms of mean absolute error (MAE) is 2.04% for <math><msub><mi>D</mi> <mn>99</mn></msub> </math> , 1.54% for <math><msub><mi>D</mi> <mn>95</mn></msub> </math> , 1.87% for <math><msub><mi>D</mi> <mn>1</mn></msub> </math> , 1.87% for <math><msub><mi>D</mi> <mrow><mi>mean</mi></mrow> </msub> </math> , 1.89% for <math><msub><mi>D</mi> <mrow><mn>0.1</mn> <mi>c</mi> <mi>c</mi></mrow> </msub> </math> , respectively, superior to the other three models. The quantitative results demonstrated that the proposed MST model achieved more accurate voxel-level dose prediction than the previous models for head and neck tumors. The MST model has a great potential to be applied to other disease sites to further improve the quality and efficiency of radiotherapy planning.</p>","PeriodicalId":48490,"journal":{"name":"Physical and Engineering Sciences in Medicine","volume":null,"pages":null},"PeriodicalIF":2.4000,"publicationDate":"2024-08-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Deep learning architecture with shunted transformer and 3D deformable convolution for voxel-level dose prediction of head and neck tumors.\",\"authors\":\"Liting Chen, Hongfei Sun, Zhongfei Wang, Te Zhang, Hailang Zhang, Wei Wang, Xiaohuan Sun, Jie Duan, Yue Gao, Lina Zhao\",\"doi\":\"10.1007/s13246-024-01462-5\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Intensity-modulated radiation therapy (IMRT) has been widely used in treating head and neck tumors. However, due to the complex anatomical structures in the head and neck region, it is challenging for the plan optimizer to rapidly generate clinically acceptable IMRT treatment plans. A novel deep learning multi-scale Transformer (MST) model was developed in the current study aiming to accelerate the IMRT planning for head and neck tumors while generating more precise prediction of the voxel-level dose distribution. The proposed end-to-end MST model employs the shunted Transformer to capture multi-scale features and learn a global dependency, and utilizes 3D deformable convolution bottleneck blocks to extract shape-aware feature and compensate the loss of spatial information in the patch merging layers. Moreover, data augmentation and self-knowledge distillation are used to further improve the prediction performance of the model. The MST model was trained and evaluated on the OpenKBP Challenge dataset. Its prediction accuracy was compared with three previous dose prediction models: C3D, TrDosePred, and TSNet. The predicted dose distributions of our proposed MST model in the tumor region are closest to the original clinical dose distribution. The MST model achieves the dose score of 2.23 Gy and the DVH score of 1.34 Gy on the test dataset, outperforming the other three models by 8%-17%. For clinical-related DVH dosimetric metrics, the prediction accuracy in terms of mean absolute error (MAE) is 2.04% for <math><msub><mi>D</mi> <mn>99</mn></msub> </math> , 1.54% for <math><msub><mi>D</mi> <mn>95</mn></msub> </math> , 1.87% for <math><msub><mi>D</mi> <mn>1</mn></msub> </math> , 1.87% for <math><msub><mi>D</mi> <mrow><mi>mean</mi></mrow> </msub> </math> , 1.89% for <math><msub><mi>D</mi> <mrow><mn>0.1</mn> <mi>c</mi> <mi>c</mi></mrow> </msub> </math> , respectively, superior to the other three models. The quantitative results demonstrated that the proposed MST model achieved more accurate voxel-level dose prediction than the previous models for head and neck tumors. The MST model has a great potential to be applied to other disease sites to further improve the quality and efficiency of radiotherapy planning.</p>\",\"PeriodicalId\":48490,\"journal\":{\"name\":\"Physical and Engineering Sciences in Medicine\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.4000,\"publicationDate\":\"2024-08-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Physical and Engineering Sciences in Medicine\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1007/s13246-024-01462-5\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Physical and Engineering Sciences in Medicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1007/s13246-024-01462-5","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0

摘要

调强放射治疗(IMRT)已被广泛用于治疗头颈部肿瘤。然而,由于头颈部的解剖结构复杂,计划优化器要快速生成临床上可接受的 IMRT 治疗计划具有挑战性。本研究开发了一种新型深度学习多尺度变换器(MST)模型,旨在加速头颈部肿瘤的 IMRT 计划,同时生成更精确的体素级剂量分布预测。所提出的端到端 MST 模型利用分流变换器捕捉多尺度特征并学习全局依赖性,同时利用三维可变形卷积瓶颈块提取形状感知特征并补偿补片合并层中的空间信息损失。此外,还利用数据增强和自知提炼进一步提高了模型的预测性能。MST 模型在 OpenKBP 挑战赛数据集上进行了训练和评估。其预测准确性与之前的三个剂量预测模型进行了比较:C3D、TrDosePred 和 TSNet。我们提出的 MST 模型在肿瘤区域的预测剂量分布与原始临床剂量分布最为接近。在测试数据集上,MST 模型获得了 2.23 Gy 的剂量评分和 1.34 Gy 的 DVH 评分,比其他三个模型高出 8%-17%。在与临床相关的 DVH 剂量学指标方面,以平均绝对误差(MAE)计,D 99 的预测准确率为 2.04%,D 95 为 1.54%,D 1 为 1.87%,D mean 为 1.87%,D 0.1 c c 为 1.89%,分别优于其他三个模型。定量结果表明,与之前的头颈部肿瘤剂量预测模型相比,所提出的 MST 模型实现了更精确的体素级剂量预测。MST模型在其他疾病部位的应用潜力巨大,可进一步提高放疗计划的质量和效率。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Deep learning architecture with shunted transformer and 3D deformable convolution for voxel-level dose prediction of head and neck tumors.

Intensity-modulated radiation therapy (IMRT) has been widely used in treating head and neck tumors. However, due to the complex anatomical structures in the head and neck region, it is challenging for the plan optimizer to rapidly generate clinically acceptable IMRT treatment plans. A novel deep learning multi-scale Transformer (MST) model was developed in the current study aiming to accelerate the IMRT planning for head and neck tumors while generating more precise prediction of the voxel-level dose distribution. The proposed end-to-end MST model employs the shunted Transformer to capture multi-scale features and learn a global dependency, and utilizes 3D deformable convolution bottleneck blocks to extract shape-aware feature and compensate the loss of spatial information in the patch merging layers. Moreover, data augmentation and self-knowledge distillation are used to further improve the prediction performance of the model. The MST model was trained and evaluated on the OpenKBP Challenge dataset. Its prediction accuracy was compared with three previous dose prediction models: C3D, TrDosePred, and TSNet. The predicted dose distributions of our proposed MST model in the tumor region are closest to the original clinical dose distribution. The MST model achieves the dose score of 2.23 Gy and the DVH score of 1.34 Gy on the test dataset, outperforming the other three models by 8%-17%. For clinical-related DVH dosimetric metrics, the prediction accuracy in terms of mean absolute error (MAE) is 2.04% for D 99 , 1.54% for D 95 , 1.87% for D 1 , 1.87% for D mean , 1.89% for D 0.1 c c , respectively, superior to the other three models. The quantitative results demonstrated that the proposed MST model achieved more accurate voxel-level dose prediction than the previous models for head and neck tumors. The MST model has a great potential to be applied to other disease sites to further improve the quality and efficiency of radiotherapy planning.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
8.40
自引率
4.50%
发文量
110
期刊最新文献
PET/CT-based 3D multi-class semantic segmentation of ovarian cancer and the stability of the extracted radiomics features. PPG2RespNet: a deep learning model for respirational signal synthesis and monitoring from photoplethysmography (PPG) signal Ecg signal watermarking using QR decomposition Effect of mirror system and scanner bed of a flatbed scanner on lateral response artefact in radiochromic film dosimetry A deep learning phase-based solution in 2D echocardiography motion estimation
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1