进化军备竞赛:木聚糖修饰在植物与病原体相互作用中的作用。

IF 8.3 1区 生物学 Q1 PLANT SCIENCES New Phytologist Pub Date : 2024-08-21 DOI:10.1111/nph.20071
Jenny C. Mortimer, Henrik V. Scheller
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Yu <i>et al</i>. show that the relatively small modification of the xylan structure resulted in most pathogens being unable to degrade the xylan backbone with GH30 endo-glucuronoxylanases, a class of hydrolases that cut the xylan backbone near glucuronic acid substitutions (Puchart <i>et al</i>., <span>2021</span>; Fig. 1). The authors then proceed to show how some pathogens have further evolved modifications to their GH30 endo-glucuronoxylanases that led to regaining the ability to degrade xylan despite substitution of glucuronic acid residues with arabinose or galactose. This gain of function modification to GH30 endo-glucuronoxylanases has occurred independently in different bacterial strains through convergent evolution. These careful observations strongly support that xylan modification was driven – at least in part – by the ability to resist cell wall degradation by invading pathogens. 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The study by Yu <i>et al</i>. has shown one way to explore these interplays, opening up a new and exciting field of research.</p><p>In the system studied by Yu <i>et al</i>., it remains to be determined how much of a role the differences in xylan substitutions play in the resistance to different pathogens. Plant pathogens typically secrete multiple cell wall-degrading enzymes and do not rely on a single hydrolase. Infecting plants with and without glucuronic acid substitutions with pathogen strains that have different types of GH30 endo-glucuronoxylanases would provide an approach to answer that. Such studies would also aid in understanding the prospect of improving crop tolerance to disease by targeted modification of wall polymers. This is not necessarily simple, since wall degradation products also induce defense responses in plants (Molina <i>et al</i>., <span>2021</span>; Delmer <i>et al</i>., <span>2024</span>). For example, it has been observed that Arabidopsis mutants with altered cell wall composition very often show altered defense response to some pathogens (Molina <i>et al</i>., <span>2021</span>). It will also be interesting to see whether there are similar patterns of enzyme evolution in the glycosyl hydrolases of insect pests or the microbiomes of herbivores.</p>","PeriodicalId":214,"journal":{"name":"New Phytologist","volume":null,"pages":null},"PeriodicalIF":8.3000,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/nph.20071","citationCount":"0","resultStr":"{\"title\":\"Evolutionary arms race: the role of xylan modifications in plant–pathogen interactions\",\"authors\":\"Jenny C. Mortimer,&nbsp;Henrik V. 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引用次数: 0

摘要

木聚糖的葡萄糖醛酸取代物会影响木聚糖的构象以及木聚糖与纤维素微纤维相互作用的能力(Simmons 等人,2016 年)。不过,根据我们目前对葡萄糖醛酸取代作用的理解,没有充分理由认为葡萄糖醛酸残基的存在或不存在进一步取代会对壁的物理性质产生重大影响。虽然带电残基有助于保持聚合物的溶解性并介导与其他细胞壁成分的相互作用,但植物似乎可以通过增加乙酰化来补偿葡萄糖醛酸的减少(Grantham 等人,2017 年)。这再次提出了一个问题:是什么进化压力导致了某些植物中 XAPT1 和 XLPT1 的进化?Yu 等人的研究表明,木聚糖结构相对较小的改性导致大多数病原体无法利用 GH30 内切-葡糖醛酸氧聚糖酶降解木聚糖骨架,该类水解酶可在葡糖醛酸取代处附近切割木聚糖骨架(Puchart 等人,2021 年;图 1)。作者接着展示了一些病原体如何进一步进化改造其 GH30 内切-葡糖醛酸氧聚糖酶,从而在葡糖醛酸残基被阿拉伯糖或半乳糖取代的情况下重新获得降解木聚糖的能力。GH30 内切-葡糖醛酸氧聚糖酶的这种功能增益修饰是通过趋同进化在不同细菌菌株中独立发生的。这些细致的观察结果有力地证明,木聚糖修饰至少部分是由抵抗入侵病原体降解细胞壁的能力所驱动的。此外,我们现在有了一个植物与病原体之间进化军备竞赛的明显例子,其中涉及详细的细胞壁结构和能够降解它们的微生物酶。值得注意的是,具有降解取代葡萄糖醛酸木聚糖能力的 Dickeya chrysanthemi 菌株是从具有大量葡萄糖醛酸木聚糖取代物的植物中分离出来的,而另一株 D. Chrysanthemi 菌株则无法降解取代葡萄糖醛酸木聚糖。 XAPT1 和 XLPT1 对木聚糖的修饰只是植物物种间壁聚合物精细结构不同的一个例子。XAPT1 和 XLPT1 对木聚糖的修饰只是植物物种间壁聚合物细微结构差异的一个例子。还有许多其他已知的例子,例如木聚糖和果胶的侧链结构。这些结构可能是某些组织所特有的,例如玉米麸皮中发现的高度复杂的杂氧聚糖(Allerdings 等人,2006 年),或者是物种栖息地所特有的,例如海洋海草(包括 Zostera、Posidonia 和 Amphibolis 在内的一个多态群)和浮萍(Lemnoidea)中发现的 apiogalacturonan,而非水生植物中却没有发现(Avci 等人,2018 年;Pfeifer 等人,2022 年)。还有许多例子表明不同壁聚合物的相对数量存在定量差异,例如芹菜中木糖含量极低(Thimm 等人,2002 年),以及藜科植物中果胶的阿魏酸酯化(Harris & Trethewey, 2010 年)。虽然其中一些差异可能会对果壁的完整性和功能产生物理影响,但它们也很可能在与病原体的进化军备竞赛中发挥作用。Yu 等人的研究展示了探索这些相互作用的一种方法,开辟了一个令人兴奋的新研究领域。在 Yu 等人研究的系统中,木聚糖替代物的差异在抵御不同病原体方面发挥了多大作用仍有待确定。植物病原体通常会分泌多种细胞壁降解酶,并不依赖单一的水解酶。用具有不同类型 GH30 内切-葡萄糖醛酸氧聚糖酶的病原体菌株感染具有和不具有葡萄糖醛酸取代的植物,将提供一种方法来回答这个问题。此类研究还有助于了解通过有针对性地改变植物壁聚合物来提高作物抗病能力的前景。这并不一定简单,因为壁降解产物也会诱导植物的防御反应(Molina 等人,2021 年;Delmer 等人,2024 年)。例如,据观察,细胞壁成分发生改变的拟南芥突变体往往对某些病原体的防御反应发生改变(Molina 等人,2021 年)。我们也有兴趣了解害虫的糖基水解酶或食草动物的微生物组中是否存在类似的酶进化模式。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Evolutionary arms race: the role of xylan modifications in plant–pathogen interactions

Glucuronic acid substitutions of xylan affect the conformation of xylan and the ability of xylan to interact with cellulose microfibrils (Simmons et al., 2016). However, based on our current understanding of the role of glucuronic acid substitutions, there is no strong reason to expect the presence or absence of further substitution of glucuronic acid residues to have a significant impact on the physical properties of the wall. While the charged residues help maintain polymer solubility and mediate interactions with other cell wall components, it seems that the plant can compensate for a reduction in glucuronic acid by an increase in acetylation (Grantham et al., 2017). This again opens the question of what evolutionary pressure led to the evolution of XAPT1 and XLPT1 in some plants. Yu et al. show that the relatively small modification of the xylan structure resulted in most pathogens being unable to degrade the xylan backbone with GH30 endo-glucuronoxylanases, a class of hydrolases that cut the xylan backbone near glucuronic acid substitutions (Puchart et al., 2021; Fig. 1). The authors then proceed to show how some pathogens have further evolved modifications to their GH30 endo-glucuronoxylanases that led to regaining the ability to degrade xylan despite substitution of glucuronic acid residues with arabinose or galactose. This gain of function modification to GH30 endo-glucuronoxylanases has occurred independently in different bacterial strains through convergent evolution. These careful observations strongly support that xylan modification was driven – at least in part – by the ability to resist cell wall degradation by invading pathogens. Furthermore, we now have a clear example of an evolutionary arms race between plants and pathogens, involving the detailed cell wall structure and the microbial enzymes that can degrade them.

Notably, the strain of Dickeya chrysanthemi that had the ability to degrade xylan with substituted glucuronoxylan was isolated from a plant with abundant glucuronoxylan substitutions, whereas another strain of D. chrysanthemi was unable to degrade substituted glucuronoxylan and was isolated from corn, which is devoid of such substitutions.

The modification of xylan by XAPT1 and XLPT1 is only one example of fine structure in wall polymers that differ between plant species. There are many other known examples, for example in the sidechain structure of xyloglucan and pectins. These may be specific to certain tissues, such as the highly complex heteroxylan found in corn bran (Allerdings et al., 2006) or species habitat, such as the apiogalacturonan found in marine seagrasses (a polyphyletic group including Zostera, Posidonia, and Amphibolis) and duckweeds (Lemnoidea) but not in nonaquatic plants (Avci et al., 2018; Pfeifer et al., 2022). There are also many examples of quantitative differences in the relative amounts of different wall polymers, such as the very low content of xyloglucan in celery (Thimm et al., 2002) and the ferulic acid esterification of pectin in Chenopodiaceae (Harris & Trethewey, 2010). While some of these differences may have physical implications for the wall integrity and function, it seems highly likely that they also play a role in the evolutionary arms race with pathogens. The study by Yu et al. has shown one way to explore these interplays, opening up a new and exciting field of research.

In the system studied by Yu et al., it remains to be determined how much of a role the differences in xylan substitutions play in the resistance to different pathogens. Plant pathogens typically secrete multiple cell wall-degrading enzymes and do not rely on a single hydrolase. Infecting plants with and without glucuronic acid substitutions with pathogen strains that have different types of GH30 endo-glucuronoxylanases would provide an approach to answer that. Such studies would also aid in understanding the prospect of improving crop tolerance to disease by targeted modification of wall polymers. This is not necessarily simple, since wall degradation products also induce defense responses in plants (Molina et al., 2021; Delmer et al., 2024). For example, it has been observed that Arabidopsis mutants with altered cell wall composition very often show altered defense response to some pathogens (Molina et al., 2021). It will also be interesting to see whether there are similar patterns of enzyme evolution in the glycosyl hydrolases of insect pests or the microbiomes of herbivores.

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New Phytologist
New Phytologist 生物-植物科学
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期刊介绍: New Phytologist is an international electronic journal published 24 times a year. It is owned by the New Phytologist Foundation, a non-profit-making charitable organization dedicated to promoting plant science. The journal publishes excellent, novel, rigorous, and timely research and scholarship in plant science and its applications. The articles cover topics in five sections: Physiology & Development, Environment, Interaction, Evolution, and Transformative Plant Biotechnology. These sections encompass intracellular processes, global environmental change, and encourage cross-disciplinary approaches. The journal recognizes the use of techniques from molecular and cell biology, functional genomics, modeling, and system-based approaches in plant science. Abstracting and Indexing Information for New Phytologist includes Academic Search, AgBiotech News & Information, Agroforestry Abstracts, Biochemistry & Biophysics Citation Index, Botanical Pesticides, CAB Abstracts®, Environment Index, Global Health, and Plant Breeding Abstracts, and others.
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