19F 快速魔角旋转核磁共振波谱分析含氟配体与 Galectin-3 碳水化合物识别域的微晶复合物

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemistry Biochemistry Pub Date : 2024-07-15 DOI:10.1021/acs.biochem.4c0023210.1021/acs.biochem.4c00232
Roza Kalabekova, Caitlin M. Quinn, Kumar Tekwani Movellan, Angela M. Gronenborn*, Mikael Akke* and Tatyana Polenova*, 
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引用次数: 0

摘要

原子分辨率的蛋白质配体结合界面结构表征对于改进特异性强效抑制剂的设计至关重要。在此,我们利用快速 19F 和 1H 检测魔角旋转 NMR 光谱来研究两种含氟配体非对映异构体与微晶 galectin-3 碳水化合物识别结构域之间的相互作用。通过二维 13C-19F 和 1H-19F 双极性相关实验绘制了氟原子周围的详细环境图谱,从而确定了结合界面的特征。我们的研究结果表明,19F MAS NMR 是在原子水平上详细描述蛋白质配体界面和蛋白质相互作用的有力工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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19F Fast Magic-Angle Spinning NMR Spectroscopy on Microcrystalline Complexes of Fluorinated Ligands and the Carbohydrate Recognition Domain of Galectin-3

Structural characterization of protein–ligand binding interfaces at atomic resolution is essential for improving the design of specific and potent inhibitors. Herein, we explored fast 19F- and 1H-detected magic angle spinning NMR spectroscopy to investigate the interaction between two fluorinated ligand diastereomers with the microcrystalline galectin-3 carbohydrate recognition domain. The detailed environment around the fluorine atoms was mapped by 2D 13C–19F and 1H–19F dipolar correlation experiments and permitted characterization of the binding interface. Our results demonstrate that 19F MAS NMR is a powerful tool for detailed characterization of protein–ligand interfaces and protein interactions at the atomic level.

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来源期刊
Biochemistry Biochemistry
Biochemistry Biochemistry 生物-生化与分子生物学
CiteScore
5.50
自引率
3.40%
发文量
336
审稿时长
1-2 weeks
期刊介绍: Biochemistry provides an international forum for publishing exceptional, rigorous, high-impact research across all of biological chemistry. This broad scope includes studies on the chemical, physical, mechanistic, and/or structural basis of biological or cell function, and encompasses the fields of chemical biology, synthetic biology, disease biology, cell biology, nucleic acid biology, neuroscience, structural biology, and biophysics. In addition to traditional Research Articles, Biochemistry also publishes Communications, Viewpoints, and Perspectives, as well as From the Bench articles that report new methods of particular interest to the biological chemistry community.
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