全基因组孟德尔随机化确定了治疗阿尔茨海默病的铁突变相关药物靶点

IF 2.8 Q2 NEUROSCIENCES Journal of Alzheimer's disease reports Pub Date : 2024-09-05 eCollection Date: 2024-01-01 DOI:10.3233/ADR-240062
Ying Wang, Xinhua Song, Rui Wang, Xinzi Xu, Yaming Du, Guohua Chen, Junhua Mei
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引用次数: 0

摘要

背景:阿尔茨海默病(AD)目前缺乏有效的疾病改变疗法。最近的研究表明,铁突变可能是一个潜在的治疗靶点。孟德尔随机化(MR)是一种广泛应用于确定新型治疗靶点的方法:方法:我们从 FerrDb 中获得了 564 个与铁氧化相关的基因。我们利用四个脑定量性状位点(QTL)和两个血液QTL数据集得出了这些基因的遗传工具变量。我们采用基于摘要数据的孟德尔随机化(SMR)和双样本 MR 方法来估计铁突变相关基因对 AD 的因果效应。利用外部转录组数据集和三重转基因小鼠AD模型(3xTg-AD)进一步验证MR分析确定的基因靶标:结果:我们从GTEx、PsychENCODE和BrainMeta中分别发现了17个、13个和22个潜在的AD风险基因靶点(SMR p p > 0.05)。我们发现了 6 个与 AD 相关的重叠铁蛋白沉积相关基因,这些基因可作为潜在的治疗靶点(PEX10、CDC25A、表皮生长因子受体、DLD、LIG3 和 TRIB3)。此外,我们还进一步确定了血液组织和 pQTL 水平上的风险基因或蛋白。值得注意的是,表皮生长因子受体在外部转录组数据集和 3xTg-AD 模型中表现出明显的失调:本研究提供的遗传学证据支持了靶向治疗AD的六个可药用基因的潜在治疗效果,尤其是表皮生长因子受体(通过转录组和3xTg-AD验证),这可能有助于在铁变态反应领域优先开发AD药物。
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Genome-Wide Mendelian Randomization Identifies Ferroptosis-Related Drug Targets for Alzheimer's Disease.

Background: Alzheimer's disease (AD) currently lacks effective disease-modifying treatments. Recent research suggests that ferroptosis could be a potential therapeutic target. Mendelian randomization (MR) is a widely used method for identifying novel therapeutic targets.

Objective: Employ genetic information to evaluate the causal impact of ferroptosis-related genes on the risk of AD.

Methods: 564 ferroptosis-related genes were obtained from FerrDb. We derived genetic instrumental variables for these genes using four brain quantitative trait loci (QTL) and two blood QTL datasets. Summary-data-based Mendelian randomization (SMR) and two-sample MR methods were applied to estimate the causal effects of ferroptosis-related genes on AD. Using extern transcriptomic datasets and triple-transgenic mouse model of AD (3xTg-AD) to further validate the gene targets identified by the MR analysis.

Results: We identified 17 potential AD risk gene targets from GTEx, 13 from PsychENCODE, and 22 from BrainMeta (SMR p < 0.05 and HEIDI test p > 0.05). Six overlapping ferroptosis-related genes associated with AD were identified, which could serve as potential therapeutic targets (PEX10, CDC25A, EGFR, DLD, LIG3, and TRIB3). Additionally, we further pinpointed risk genes or proteins at the blood tissue and pQTL levels. Notably, EGFR demonstrated significant dysregulation in the extern transcriptomic datasets and 3xTg-AD models.

Conclusions: This study provides genetic evidence supporting the potential therapeutic benefits of targeting the six druggable genes for AD treatment, especially for EGFR (validated by transcriptome and 3xTg-AD), which could be useful for prioritizing AD drug development in the field of ferroptosis.

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