抗免疫球蛋白 G 的单域抗体的 1H、15N 和 13C 共振赋值

IF 0.8 4区 生物学 Q4 BIOPHYSICS Biomolecular NMR Assignments Pub Date : 2024-09-13 DOI:10.1007/s12104-024-10199-x
Vanessa Bezerra de Oliveira Leite, Rafael Alves de Andrade, Fabio Ceneviva Lacerda de Almeida, Claudia Jorge do Nascimento, Talita Stelling de Araujo, Marcius da Silva Almeida
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摘要

对源自骆驼的单域抗体(sdAbs)的研究表明,它们在治疗和诊断等多种生物技术应用中具有重要作用。这主要是由于它们作为单体蛋白相对简单,分子量在 12 到 15 kDa 之间,而免疫球蛋白 G(IgG)抗体是 150-160 kDa 的糖基化杂四聚体。单域抗体具有很高的构象稳定性,采用典型的免疫球蛋白域折叠,由 7-9 条反向平行的 beta 链组成的两层夹层构成。它们包含三个环,称为互补决定区(CDR),这些环聚集在单链抗体表面,负责识别抗原。本研究中考察的单域抗体sdAb-mrh-IgG经设计可识别来自大鼠和小鼠的IgG,但它也能微弱地识别来自人类的IgG(Pleiner等人,2018年)。在蛋白质数据库(Protein Data Bank)中搜索发现,只有一种单域抗体的核磁共振结构与 sdAb-mrh-IgG 无关。将利用 sdAb-mrh-IgG 的核磁共振化学位移分配来研究其分子动力学以及与溶液中抗原的相互作用,这对于合理设计新型单域抗体至关重要。
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The 1H, 15N, and 13C resonance assignments of a single-domain antibody against immunoglobulin G

Research on camelid-derived single-domain antibodies (sdAbs) has demonstrated their significant utility in diverse biotechnological applications, including therapy and diagnostic. This is largely due to their relative simplicity as monomeric proteins, ranging from 12 to 15 kDa, in contrast to immunoglobulin G (IgG) antibodies, which are glycosylated heterotetramers of 150–160 kDa. Single-domain antibodies exhibit high conformational stability and adopt the typical immunoglobulin domain fold, consisting of a two-layer sandwich of 7–9 antiparallel beta-strands. They contain three loops, known as complementary-determining regions (CDRs), which are assembled on the sdAb surface and are responsible for antigen recognition. The single-domain antibody examined in this study, sdAb-mrh-IgG, was engineered to recognize IgG from rats, mice, but it also weakly recognizes IgG from humans (Pleiner et al. 2018). A search of the Protein Data Bank revealed only one NMR structure of a single-domain antibody, which is unrelated to sdAb-mrh-IgG. The NMR chemical shift assignments of sdAb-mrh-IgG will be utilized to study its molecular dynamics and interactions with antigens in solution, which is fundamental for the rational design of novel single-domain antibodies.

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来源期刊
Biomolecular NMR Assignments
Biomolecular NMR Assignments 生物-光谱学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Biomolecular NMR Assignments provides a forum for publishing sequence-specific resonance assignments for proteins and nucleic acids as Assignment Notes. Chemical shifts for NMR-active nuclei in macromolecules contain detailed information on molecular conformation and properties. Publication of resonance assignments in Biomolecular NMR Assignments ensures that these data are deposited into a public database at BioMagResBank (BMRB; http://www.bmrb.wisc.edu/), where they are available to other researchers. Coverage includes proteins and nucleic acids; Assignment Notes are processed for rapid online publication and are published in biannual online editions in June and December.
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