应变刚性水凝胶中的细胞自组织建模

IF 3.7 2区 工程技术 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Computational Mechanics Pub Date : 2024-08-31 DOI:10.1007/s00466-024-02536-7
A. H. Erhardt, D. Peschka, C. Dazzi, L. Schmeller, A. Petersen, S. Checa, A. Münch, B. Wagner
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引用次数: 0

摘要

我们推导出一个三维水凝胶模型,它是由纤维网络和液体溶剂组成的两相系统,其中非线性弹性网络代表了生物凝胶中常见的应变加固特性。我们使用该模型来计算水凝胶层的自由边界值问题,该问题允许水凝胶层膨胀或收缩。我们分别推导出了厚层和薄层的二维平应变和平应力近似值,它们受到外部载荷的影响,可作为细胞附着和生长支架的最小模型。对于细胞与水凝胶层发生机械相互作用时的集体演化,我们将其与基于代理的模型相结合,该模型还考虑了迁移过程中每个细胞对水凝胶片和其他细胞施加的牵引力。我们为耦合系统开发了一种数值算法,并展示了应变刚度、层几何形状、外部载荷和溶剂流入/流出对层形状和细胞形态的影响。特别是,我们讨论了在不同条件下细胞的排列和链的形成。
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Modeling cellular self-organization in strain-stiffening hydrogels

We derive a three-dimensional hydrogel model as a two-phase system of a fibre network and liquid solvent, where the nonlinear elastic network accounts for the strain-stiffening properties typically encountered in biological gels. We use this model to formulate free boundary value problems for a hydrogel layer that allows for swelling or contraction. We derive two-dimensional plain-strain and plain-stress approximations for thick and thin layers respectively, that are subject to external loads and serve as a minimal model for scaffolds for cell attachment and growth. For the collective evolution of the cells as they mechanically interact with the hydrogel layer, we couple it to an agent-based model that also accounts for the traction force exerted by each cell on the hydrogel sheet and other cells during migration. We develop a numerical algorithm for the coupled system and present results on the influence of strain-stiffening, layer geometry, external load and solvent in/outflux on the shape of the layers and on the cell patterns. In particular, we discuss alignment of cells and chain formation under varying conditions.

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来源期刊
Computational Mechanics
Computational Mechanics 物理-力学
CiteScore
7.80
自引率
12.20%
发文量
122
审稿时长
3.4 months
期刊介绍: The journal reports original research of scholarly value in computational engineering and sciences. It focuses on areas that involve and enrich the application of mechanics, mathematics and numerical methods. It covers new methods and computationally-challenging technologies. Areas covered include method development in solid, fluid mechanics and materials simulations with application to biomechanics and mechanics in medicine, multiphysics, fracture mechanics, multiscale mechanics, particle and meshfree methods. Additionally, manuscripts including simulation and method development of synthesis of material systems are encouraged. Manuscripts reporting results obtained with established methods, unless they involve challenging computations, and manuscripts that report computations using commercial software packages are not encouraged.
期刊最新文献
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